CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY54088	Canola	cytosol	86.92	95.88
CDY52365	Canola	cytosol	76.64	63.57
CDX94438	Canola	cytosol	74.77	62.02
CDX89411	Canola	cytosol	73.83	61.24
AT4G25590.1	Thale cress	cytosol	75.7	59.12
KRG91521	Soybean	cytosol	73.83	57.66
KRH35309	Soybean	cytosol	73.83	57.66
CDY31909	Canola	cytosol	69.16	56.92
PGSC0003DMT400037205	Potato	cytosol	70.09	54.74
Solyc03g025750.2.1	Tomato	cytosol	69.16	54.01
CDY31586	Canola	cytosol	59.81	48.48
CDX71067	Canola	cytosol	58.88	47.73
CDX92721	Canola	mitochondrion	78.5	46.93
CDX88730	Canola	cytosol	66.36	46.1
CDX90057	Canola	cytosol	56.07	45.11
CDY09242	Canola	cytosol	64.49	45.1
CDY15154	Canola	cytosol	60.75	43.33
CDX71068	Canola	cytosol	66.36	43.29
GSMUA_Achr4P29400_001	Banana	cytosol	38.32	41.84
CDY24750	Canola	cytosol	56.07	41.1
CDY10786	Canola	cytosol	55.14	40.41
CDX86048	Canola	cytosol, plastid	62.62	40.12
CDX99133	Canola	cytosol, plastid	62.62	40.12
CDY50194	Canola	cytosol	78.5	39.44
CDY38025	Canola	cytosol	62.62	38.07
CDX89737	Canola	cytosol	50.47	37.76
CDY02247	Canola	cytosol	49.53	37.06
CDX88731	Canola	cytosol, plastid	65.42	35.18
CDX75477	Canola	cytosol	39.25	34.71
CDY40654	Canola	cytosol	39.25	34.15
CDX69101	Canola	cytosol	44.86	33.8
CDX72508	Canola	cytosol	42.99	33.58
CDX80216	Canola	cytosol	66.36	28.17
CDY07204	Canola	cytosol	60.75	23.99
CDY51146	Canola	cytosol, mitochondrion	62.62	19.03
CDY02249	Canola	cytosol	8.41	13.85
CDY32581	Canola	cytosol	5.61	11.11

Protein Annotations

MapMan:20.2.2.8	Gene3D:3.40.20.10	GO:A0A078K287	UniProt:A0A078K287	InterPro:ADF-H	InterPro:ADF-H/Gelsolin-like_dom_sf
InterPro:ADF/Cofilin	EnsemblPlants:CDY72027	ProteinID:CDY72027	ProteinID:CDY72027.1	GO:GO:0003674	GO:GO:0003779
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005856
GO:GO:0008150	GO:GO:0009987	GO:GO:0015629	GO:GO:0016043	GO:GO:0030042	EnsemblPlantsGene:GSBRNA2T00023236001
InterPro:IPR002108	InterPro:IPR029006	PFAM:PF00241	PFscan:PS51263	PANTHER:PTHR11913	PANTHER:PTHR11913:SF33
SMART:SM00102	SUPFAM:SSF55753	UniParc:UPI0004EAB49E	:	:	:

Description

BnaCnng75650DBnaCnng75650D protein [Source:UniProtKB/TrEMBL;Acc:A0A078K287]

Coordinates

chrLK048633:-:477..912

Molecular Weight (calculated)

12293.7 Da

IEP (calculated)

8.200

GRAVY (calculated)

-0.303

Length

107 amino acids

Sequence
(BLAST)

001: MNEKANAASG MAVEDNCKLK FLELKKRTHR FIIFRIDGQQ VVVEKLGSPQ ETYEDFSASL PADECRYAVF DFDFTTNENC QKSKIFFIAC ITTFNVRKYA
101: VKFCGKP

Best Arabidopsis Sequence Match ( AT4G25590.1 )
(BLAST)

001: MANAASGMAV EDECKLKFLE LKSKRNYRFI IFRIDGQQVV VEKLGNPDET YDDFTASLPA NECRYAVFDF DFITDENCQK SKIFFIAWSP DSSRVRMKMV
101: YASSKDRFKR ELDGIQVELQ ATDPSEMSFD IIKSRAL

Arabidopsis Description

ADF7Actin-depolymerizing factor 7 [Source:UniProtKB/Swiss-Prot;Acc:Q67ZM4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.