Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 3
- mitochondrion 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY32581 | Canola | cytosol | 44.62 | 53.7 |
| CDX75477 | Canola | cytosol | 75.38 | 40.5 |
| CDY40654 | Canola | cytosol | 73.85 | 39.02 |
| CDY02247 | Canola | cytosol | 84.62 | 38.46 |
| CDX89737 | Canola | cytosol | 84.62 | 38.46 |
| CDX72508 | Canola | cytosol | 75.38 | 35.77 |
| CDX69101 | Canola | cytosol | 75.38 | 34.51 |
| GSMUA_AchrUn_... | Banana | extracellular | 46.15 | 34.48 |
| CDX89411 | Canola | cytosol | 52.31 | 26.36 |
| CDX94438 | Canola | cytosol | 52.31 | 26.36 |
| CDY52365 | Canola | cytosol | 52.31 | 26.36 |
| CDY31909 | Canola | cytosol | 52.31 | 26.15 |
| CDY10786 | Canola | cytosol | 58.46 | 26.03 |
| CDX90057 | Canola | cytosol | 50.77 | 24.81 |
| CDY24750 | Canola | cytosol | 53.85 | 23.97 |
| CDY31586 | Canola | cytosol | 46.15 | 22.73 |
| CDY15154 | Canola | cytosol | 50.77 | 22.0 |
| CDX71067 | Canola | cytosol | 41.54 | 20.45 |
| CDX88730 | Canola | cytosol | 47.69 | 20.13 |
| CDX71068 | Canola | cytosol | 47.69 | 18.9 |
| CDX92721 | Canola | mitochondrion | 50.77 | 18.44 |
| CDY38025 | Canola | cytosol | 49.23 | 18.18 |
| CDY09242 | Canola | cytosol | 41.54 | 17.65 |
| CDX99133 | Canola | cytosol, plastid | 44.62 | 17.37 |
| CDX86048 | Canola | cytosol, plastid | 43.08 | 16.77 |
| CDY50194 | Canola | cytosol | 50.77 | 15.49 |
| CDX88731 | Canola | cytosol, plastid | 41.54 | 13.57 |
| CDX80216 | Canola | cytosol | 46.15 | 11.9 |
| CDY07204 | Canola | cytosol | 47.69 | 11.44 |
| CDY54088 | Canola | cytosol | 13.85 | 9.28 |
| CDY51146 | Canola | cytosol, mitochondrion | 47.69 | 8.81 |
| CDY72027 | Canola | cytosol | 13.85 | 8.41 |
Protein Annotations
| MapMan:20.2.2.8 | Gene3D:3.40.20.10 | GO:A0A078ENG6 | InterPro:ADF-H | InterPro:ADF-H/Gelsolin-like_dom_sf | InterPro:ADF/Cofilin |
| EnsemblPlants:CDY02249 | ProteinID:CDY02249 | ProteinID:CDY02249.1 | GO:GO:0003674 | GO:GO:0003779 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005856 | GO:GO:0008150 |
| GO:GO:0009987 | GO:GO:0015629 | GO:GO:0016043 | GO:GO:0030042 | EnsemblPlantsGene:GSBRNA2T00113669001 | InterPro:IPR002108 |
| InterPro:IPR029006 | PFAM:PF00241 | PFscan:PS51263 | PANTHER:PTHR11913 | PANTHER:PTHR11913:SF49 | SUPFAM:SSF55753 |
| UniParc:UPI0004EDBAF6 | : | : | : | : | : |
Description
BnaA03g39180D
Coordinates
chrLK031932:-:928331..928583
Molecular Weight (calculated)
7436.2 Da
IEP (calculated)
9.252
GRAVY (calculated)
0.025
Length
65 amino acids
Sequence
(BLAST)
(BLAST)
1: MVFRVLIEFL PISCIRSPEA SRIRAKILYA TSKAGLRRVL EGIHYELQAT DPTEMGFDII QDRAK
001: MAMAFKMATT GMRVTDECTS SFMDMKWKKV HRYIVFKIEE KSRKVTVDKV GGAGESYHDL EDSLPVDDCR YAVFDFDFVT VDNCRKSKIF FIAWSPEASK
101: IRAKILYATS KDGLRRVLEG IHYELQATDP TEMGFDIIQD RAK
101: IRAKILYATS KDGLRRVLEG IHYELQATDP TEMGFDIIQD RAK
Arabidopsis Description
ADF5ATADF5 [Source:UniProtKB/TrEMBL;Acc:A0A178VPY9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.