CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY72027	Canola	cytosol	95.88	86.92
CDX94438	Canola	cytosol	86.6	65.12
CDY52365	Canola	cytosol	84.54	63.57
CDX89411	Canola	cytosol	84.54	63.57
AT4G25590.1	Thale cress	cytosol	80.41	56.93
CDY31909	Canola	cytosol	76.29	56.92
KRG91521	Soybean	cytosol	74.23	52.55
KRH35309	Soybean	cytosol	74.23	52.55
Solyc03g025750.2.1	Tomato	cytosol	72.16	51.09
PGSC0003DMT400037205	Potato	cytosol	72.16	51.09
CDY31586	Canola	cytosol	67.01	49.24
CDX90057	Canola	cytosol	65.98	48.12
CDX71067	Canola	cytosol	62.89	46.21
CDX92721	Canola	mitochondrion	84.54	45.81
CDX88730	Canola	cytosol	69.07	43.51
GSMUA_Achr4P29400_001	Banana	cytosol	43.3	42.86
CDY15154	Canola	cytosol	65.98	42.67
CDX71068	Canola	cytosol	69.07	40.85
CDY09242	Canola	cytosol	62.89	39.87
CDY24750	Canola	cytosol	58.76	39.04
CDY50194	Canola	cytosol	84.54	38.5
CDY10786	Canola	cytosol	57.73	38.36
CDX86048	Canola	cytosol, plastid	63.92	37.13
CDX99133	Canola	cytosol, plastid	63.92	37.13
CDY38025	Canola	cytosol	67.01	36.93
CDX89737	Canola	cytosol	51.55	34.97
CDX75477	Canola	cytosol	42.27	33.88
CDY02247	Canola	cytosol	49.48	33.57
CDY40654	Canola	cytosol	42.27	33.33
CDX72508	Canola	cytosol	45.36	32.12
CDX69101	Canola	cytosol	46.39	31.69
CDX88731	Canola	cytosol, plastid	62.89	30.65
CDX80216	Canola	cytosol	67.01	25.79
CDY07204	Canola	cytosol	64.95	23.25
CDY51146	Canola	cytosol, mitochondrion	68.04	18.75
CDY02249	Canola	cytosol	9.28	13.85
CDY32581	Canola	cytosol	6.19	11.11

Protein Annotations

MapMan:20.2.2.8	Gene3D:3.40.20.10	GO:A0A078IYG7	UniProt:A0A078IYG7	InterPro:ADF-H	InterPro:ADF-H/Gelsolin-like_dom_sf
InterPro:ADF/Cofilin	EnsemblPlants:CDY54088	ProteinID:CDY54088	ProteinID:CDY54088.1	GO:GO:0003674	GO:GO:0003779
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005856
GO:GO:0008150	GO:GO:0009987	GO:GO:0015629	GO:GO:0016043	GO:GO:0030042	EnsemblPlantsGene:GSBRNA2T00013338001
InterPro:IPR002108	InterPro:IPR029006	PFAM:PF00241	PFscan:PS51263	PANTHER:PTHR11913	PANTHER:PTHR11913:SF33
SMART:SM00102	SUPFAM:SSF55753	UniParc:UPI0004EF069A	:	:	:

Description

BnaC08g47280DBnaC08g47280D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IYG7]

Coordinates

chrLK033275:-:55433..55838

Molecular Weight (calculated)

11372.7 Da

IEP (calculated)

8.191

GRAVY (calculated)

-0.256

Length

97 amino acids

Sequence
(BLAST)

1: MAVEDNCKLK FLELKKRTYR FIIFRIDGQQ VVVEKLGNPQ ETYDDFTASL PADECRYAVF DFDFTTNENC QKSKIFFIAC ITTFNVRKYA VKFCGKP

Best Arabidopsis Sequence Match ( AT4G25590.1 )
(BLAST)

001: MANAASGMAV EDECKLKFLE LKSKRNYRFI IFRIDGQQVV VEKLGNPDET YDDFTASLPA NECRYAVFDF DFITDENCQK SKIFFIAWSP DSSRVRMKMV
101: YASSKDRFKR ELDGIQVELQ ATDPSEMSFD IIKSRAL

Arabidopsis Description

ADF7Actin-depolymerizing factor 7 [Source:UniProtKB/Swiss-Prot;Acc:Q67ZM4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.