CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90057	Canola	cytosol	88.67	100.0
Bra033236.1-P	Field mustard	cytosol	92.67	99.29
AT1G01750.2	Thale cress	cytosol	87.33	90.34
CDY38025	Canola	cytosol	92.0	78.41
CDY32581	Canola	cytosol	28.0	77.78
CDX94438	Canola	cytosol	66.67	77.52
CDY31909	Canola	cytosol	66.67	76.92
CDX89411	Canola	cytosol	66.0	76.74
CDY52365	Canola	cytosol	65.33	75.97
CDX71067	Canola	cytosol	62.67	71.21
CDY31586	Canola	cytosol	62.0	70.45
CDY54088	Canola	cytosol	42.67	65.98
CDX88730	Canola	cytosol	67.33	65.58
CDY09242	Canola	cytosol	66.67	65.36
CDX71068	Canola	cytosol	68.0	62.2
CDY72027	Canola	cytosol	43.33	60.75
CDX99133	Canola	cytosol, plastid	66.67	59.88
CDX86048	Canola	cytosol, plastid	66.0	59.28
CDX92721	Canola	mitochondrion	70.0	58.66
CDY10786	Canola	cytosol	55.33	56.85
CDY24750	Canola	cytosol	55.33	56.85
CDX89737	Canola	cytosol	51.33	53.85
CDX75477	Canola	cytosol	43.33	53.72
CDY40654	Canola	cytosol	44.0	53.66
CDX72508	Canola	cytosol	48.67	53.28
CDY02247	Canola	cytosol	50.67	53.15
CDY02249	Canola	cytosol	22.0	50.77
CDX88731	Canola	cytosol, plastid	66.0	49.75
CDX69101	Canola	cytosol	46.67	49.3
CDY50194	Canola	cytosol	69.33	48.83
CDY07204	Canola	cytosol	78.0	43.17
CDX80216	Canola	cytosol	66.0	39.29
CDY51146	Canola	cytosol, mitochondrion	79.33	33.81

Protein Annotations

MapMan:20.2.2.8	Gene3D:3.40.20.10	GO:A0A078FQL0	UniProt:A0A078FQL0	InterPro:ADF-H	InterPro:ADF-H/Gelsolin-like_dom_sf
InterPro:ADF/Cofilin	EnsemblPlants:CDY15154	ProteinID:CDY15154	ProteinID:CDY15154.1	GO:GO:0003674	GO:GO:0003779
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005856
GO:GO:0008150	GO:GO:0009987	GO:GO:0015629	GO:GO:0016043	GO:GO:0030042	EnsemblPlantsGene:GSBRNA2T00085325001
InterPro:IPR002108	InterPro:IPR029006	PFAM:PF00241	PFscan:PS51263	PANTHER:PTHR11913	PANTHER:PTHR11913:SF30
SMART:SM00102	SUPFAM:SSF55753	UniParc:UPI0004EDE010	:	:	:

Description

BnaC05g00330DBnaC05g00330D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FQL0]

Coordinates

chrLK032052:-:155943..156634

Molecular Weight (calculated)

17362.8 Da

IEP (calculated)

7.051

GRAVY (calculated)

-0.483

Length

150 amino acids

Sequence
(BLAST)

001: MCRLCPSVSV QANSASGMHV NDECKLKFLE LKAKRNYRFI VFKIDEKAQQ VTIDMVGNPE ETYDSFTKCM PENECRYAVY DFDFTTPENC QKSKIFFIAW
101: SPDTSRVRSK MLYASSKDRF KRELDGIQVE LQATDPTEMS LDIIKGRVNL

Best Arabidopsis Sequence Match ( AT1G01750.2 )
(BLAST)

001: MCLTVQANSA SGMHVSDECK LKFLELKAKR NYRFIVFKID EKAQQVMIDK LGNPEETYED FTRSIPEDEC RYAVYDYDFT TPENCQKSKI FFIAWSPDTS
101: RVRSKMLYAS SKDRFKRELD GIQVELQATD PSEMSLDIIK GRVNL

Arabidopsis Description

ADF11actin depolymerizing factor 11 [Source:TAIR;Acc:AT1G01750]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.