CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT4G00680.2	Thale cress	cytosol, extracellular	46.13	83.33
CDX90057	Canola	cytosol	40.59	82.71
CDY15154	Canola	cytosol	43.17	78.0
CDY32581	Canola	cytosol	15.5	77.78
CDY31909	Canola	cytosol	36.53	76.15
CDX94438	Canola	cytosol	36.16	75.97
CDY52365	Canola	cytosol	35.42	74.42
CDX89411	Canola	cytosol	35.42	74.42
CDY51146	Canola	cytosol, mitochondrion	89.67	69.03
CDY31586	Canola	cytosol	33.21	68.18
CDY38025	Canola	cytosol	43.91	67.61
CDX71067	Canola	cytosol	32.84	67.42
CDY54088	Canola	cytosol	23.25	64.95
CDX88730	Canola	cytosol	36.9	64.94
CDY09242	Canola	cytosol	35.06	62.09
CDX71068	Canola	cytosol	36.9	60.98
CDY72027	Canola	cytosol	23.99	60.75
CDX99133	Canola	cytosol, plastid	36.53	59.28
CDX86048	Canola	cytosol, plastid	36.16	58.68
CDX92721	Canola	mitochondrion	37.64	56.98
CDY24750	Canola	cytosol	30.63	56.85
CDY10786	Canola	cytosol	30.26	56.16
CDX75477	Canola	cytosol	23.99	53.72
CDY40654	Canola	cytosol	23.62	52.03
CDX72508	Canola	cytosol	26.2	51.82
CDY02247	Canola	cytosol	26.94	51.05
CDX89737	Canola	cytosol	26.94	51.05
CDX69101	Canola	cytosol	25.83	49.3
CDY02249	Canola	cytosol	11.44	47.69
CDY50194	Canola	cytosol	37.27	47.42
CDX88731	Canola	cytosol, plastid	34.69	47.24
CDX80216	Canola	cytosol	35.06	37.7

Protein Annotations

MapMan:20.2.2.8	Gene3D:3.40.20.10	GO:A0A078F2N5	InterPro:ADF-H	InterPro:ADF-H/Gelsolin-like_dom_sf	InterPro:ADF/Cofilin
EnsemblPlants:CDY07204	ProteinID:CDY07204	ProteinID:CDY07204.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003779
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005856
GO:GO:0008150	GO:GO:0009987	GO:GO:0015629	GO:GO:0016043	GO:GO:0030042	EnsemblPlantsGene:GSBRNA2T00123563001
InterPro:IPR002108	InterPro:IPR029006	PFAM:PF00241	PFAM:PF03763	PFscan:PS51263	PANTHER:PTHR11913
PANTHER:PTHR11913:SF30	InterPro:Remorin_C	SMART:SM00102	SUPFAM:SSF55753	UniParc:UPI0004EF0EAA	:

Description

BnaCnng02190D

Coordinates

chrLK031975:+:803536..807272

Molecular Weight (calculated)

31325.4 Da

IEP (calculated)

9.433

GRAVY (calculated)

-0.803

Length

271 amino acids

Sequence
(BLAST)

001: MAISKVLSAN SASGMHVNDE CKVKFMELKA KRTYRYIVFK IDEKAQEVQI EKLGNPEETY DDFANSIPEN ECRYAIYDFD FTTEDNCQKS KIYFIAWSPD
101: TSRVRSKMLY ASSKDRFKRE MDGIQVELQA TDPSEMSLDI IKERALSKLF SFSRMETGKA QLSVVEAWKE EKMTKVTSKT QKKLHEISGW ENKKTRKIES
201: QIASLQRRMD GEKMEETEKL RSKKAAVHAK AREKKAKVQT RRAQEILHAE EEAVRLQATG QIPNKSSCSC F

Best Arabidopsis Sequence Match ( AT4G00680.2 )
(BLAST)

001: MTTCVCVCVV QANSASGMHV NDECKIKFLE LKAKRTYRFI VFKIDEKAQQ VQIEKLGNPE ETYDDFTSSI PDDECRYAVY DFDFTTEDNC QKSKIFFIAW
101: SPDTSRVRSK MLYASSKDRF KREMEGIQVE LQATDPSEMS LDIIKGRLNL

Arabidopsis Description

ADF8actin depolymerizing factor 8 [Source:TAIR;Acc:AT4G00680]
SUBAcon: [extracellular,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.