CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX94438	Canola	cytosol	98.45	98.45
CDX89411	Canola	cytosol	97.67	97.67
Bra010456.1-P	Field mustard	cytosol	100.0	92.81
CDY32581	Canola	cytosol	38.76	92.59
CDY31909	Canola	cytosol	92.25	91.54
AT4G25590.1	Thale cress	cytosol	93.8	88.32
CDY54088	Canola	cytosol	63.57	84.54
GSMUA_Achr4P29400_001	Banana	cytosol	62.02	81.63
PGSC0003DMT400037205	Potato	cytosol	86.05	81.02
Solyc03g025750.2.1	Tomato	cytosol	85.27	80.29
KRH35309	Soybean	cytosol	85.27	80.29
KRG91521	Soybean	cytosol	85.27	80.29
CDY72027	Canola	cytosol	63.57	76.64
CDY31586	Canola	cytosol	77.52	75.76
CDX90057	Canola	cytosol	75.97	73.68
CDX71067	Canola	cytosol	73.64	71.97
CDX92721	Canola	mitochondrion	95.35	68.72
CDX88730	Canola	cytosol	79.07	66.23
CDY15154	Canola	cytosol	75.97	65.33
CDX71068	Canola	cytosol	79.07	62.2
CDY09242	Canola	cytosol	73.64	62.09
CDY50194	Canola	cytosol	95.35	57.75
CDX99133	Canola	cytosol, plastid	73.64	56.89
CDY24750	Canola	cytosol	64.34	56.85
CDY38025	Canola	cytosol	77.52	56.82
CDX86048	Canola	cytosol, plastid	72.87	56.29
CDX75477	Canola	cytosol	51.94	55.37
CDY10786	Canola	cytosol	62.02	54.79
CDY40654	Canola	cytosol	51.94	54.47
CDX89737	Canola	cytosol	59.69	53.85
CDY02247	Canola	cytosol	58.14	52.45
CDY02249	Canola	cytosol	26.36	52.31
CDX72508	Canola	cytosol	54.26	51.09
CDX69101	Canola	cytosol	55.04	50.0
CDX88731	Canola	cytosol, plastid	73.64	47.74
CDX80216	Canola	cytosol	77.52	39.68
CDY07204	Canola	cytosol	74.42	35.42
CDY51146	Canola	cytosol, mitochondrion	75.97	27.84

Protein Annotations

MapMan:20.2.2.8	Gene3D:3.40.20.10	GO:A0A078IMQ8	UniProt:A0A078IMQ8	InterPro:ADF-H	InterPro:ADF-H/Gelsolin-like_dom_sf
InterPro:ADF/Cofilin	EnsemblPlants:CDY52365	ProteinID:CDY52365	ProteinID:CDY52365.1	GO:GO:0003674	GO:GO:0003779
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005856
GO:GO:0008150	GO:GO:0009987	GO:GO:0015629	GO:GO:0016043	GO:GO:0030042	EnsemblPlantsGene:GSBRNA2T00006800001
InterPro:IPR002108	InterPro:IPR029006	PFAM:PF00241	PFscan:PS51263	PANTHER:PTHR11913	PANTHER:PTHR11913:SF33
SMART:SM00102	SUPFAM:SSF55753	UniParc:UPI0004EECEA9	:	:	:

Description

BnaA08g31000DBnaA08g31000D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IMQ8]

Coordinates

chrLK033080:-:72509..74241

Molecular Weight (calculated)

15050.9 Da

IEP (calculated)

5.955

GRAVY (calculated)

-0.440

Length

129 amino acids

Sequence
(BLAST)

001: MAVEDNCKLK FLELKKRTHR FIIFRIDGQQ VVVEKLGSPQ ETYDDFTASL PADECRYAVF DFDFTTNENC QKSKIFFIAW SPDSSRVRMK MVYASSKDRF
101: KRELDGIQVE LQATDPSEMS FDIIKSRAL

Best Arabidopsis Sequence Match ( AT4G25590.2 )
(BLAST)

001: MAVEDECKLK FLELKSKRNY RFIIFRIDGQ QVVVEKLGNP DETYDDFTAS LPANECRYAV FDFDFITDEN CQKSKIFFIA WSPDSSRVRM KMVYASSKDR
101: FKRELDGIQV ELQATDPSEM SFDIIKSRAL

Arabidopsis Description

ADF7Actin-depolymerizing factor 7 [Source:UniProtKB/Swiss-Prot;Acc:Q67ZM4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.