CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra033236.1-P	Field mustard	cytosol	100.0	95.0
CDY15154	Canola	cytosol	100.0	88.67
AT1G01750.2	Thale cress	cytosol	90.98	83.45
CDY32581	Canola	cytosol	31.58	77.78
CDX94438	Canola	cytosol	75.19	77.52
CDY31909	Canola	cytosol	75.19	76.92
CDX89411	Canola	cytosol	74.44	76.74
CDY52365	Canola	cytosol	73.68	75.97
CDY38025	Canola	cytosol	96.24	72.73
CDX71067	Canola	cytosol	70.68	71.21
CDY31586	Canola	cytosol	69.92	70.45
CDY54088	Canola	cytosol	48.12	65.98
CDX88730	Canola	cytosol	72.18	62.34
CDY09242	Canola	cytosol	71.43	62.09
CDX71068	Canola	cytosol	72.18	58.54
CDX99133	Canola	cytosol, plastid	70.68	56.29
CDY72027	Canola	cytosol	45.11	56.07
CDX86048	Canola	cytosol, plastid	69.92	55.69
CDY10786	Canola	cytosol	60.15	54.79
CDY24750	Canola	cytosol	60.15	54.79
CDX92721	Canola	mitochondrion	72.93	54.19
CDX75477	Canola	cytosol	48.87	53.72
CDY40654	Canola	cytosol	49.62	53.66
CDX72508	Canola	cytosol	54.14	52.55
CDX89737	Canola	cytosol	56.39	52.45
CDY02247	Canola	cytosol	55.64	51.75
CDY02249	Canola	cytosol	24.81	50.77
CDX69101	Canola	cytosol	51.88	48.59
CDX88731	Canola	cytosol, plastid	70.68	47.24
CDY50194	Canola	cytosol	72.93	45.54
CDY07204	Canola	cytosol	82.71	40.59
CDX80216	Canola	cytosol	69.92	36.9
CDY51146	Canola	cytosol, mitochondrion	82.71	31.25

Protein Annotations

MapMan:20.2.2.8	Gene3D:3.40.20.10	GO:A0A078DMB7	InterPro:ADF-H	InterPro:ADF-H/Gelsolin-like_dom_sf	InterPro:ADF/Cofilin
EnsemblPlants:CDX90057	ProteinID:CDX90057	ProteinID:CDX90057.1	GO:GO:0003674	GO:GO:0003779	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005856	GO:GO:0008150
GO:GO:0009987	GO:GO:0015629	GO:GO:0016043	GO:GO:0030042	EnsemblPlantsGene:GSBRNA2T00150561001	InterPro:IPR002108
InterPro:IPR029006	PFAM:PF00241	PFscan:PS51263	PANTHER:PTHR11913	PANTHER:PTHR11913:SF30	SMART:SM00102
SUPFAM:SSF55753	UniParc:UPI0004EDB030	:	:	:	:

Description

BnaA10g00250D

Coordinates

chrLK031861:+:1450690..1451303

Molecular Weight (calculated)

15670.7 Da

IEP (calculated)

5.971

GRAVY (calculated)

-0.590

Length

133 amino acids

Sequence
(BLAST)

001: MHVNDECKLK FLELKAKRNY RFIVFKIDEK AQQVTIDMVG NPEETYDSFT KCMPENECRY AVYDFDFTTP ENCQKSKIFF IAWSPDTSRV RSKMLYASSK
101: DRFKRELDGI QVELQATDPT EMSLDIIKGR VNL

Best Arabidopsis Sequence Match ( AT1G01750.1 )
(BLAST)

001: MANSASGMHV SDECKLKFLE LKAKRNYRFI VFKIDEKAQQ VMIDKLGNPE ETYEDFTRSI PEDECRYAVY DYDFTTPENC QKSKIFFIAW SPDTSRVRSK
101: MLYASSKDRF KRELDGIQVE LQATDPSEMS LDIIKGRVNL

Arabidopsis Description

ADF11actin depolymerizing factor 11 [Source:TAIR;Acc:AT1G01750]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.