CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra019151.1-P	Field mustard	cytosol	72.07	100.0
CDX94438	Canola	cytosol	69.83	96.9
CDY52365	Canola	cytosol	68.72	95.35
CDX89411	Canola	cytosol	68.72	95.35
AT4G25590.1	Thale cress	cytosol	69.83	91.24
CDY31909	Canola	cytosol	65.36	90.0
CDY32581	Canola	cytosol	26.82	88.89
CDY54088	Canola	cytosol	45.81	84.54
PGSC0003DMT400037205	Potato	cytosol	63.69	83.21
Solyc03g025750.2.1	Tomato	cytosol	63.13	82.48
KRG91521	Soybean	cytosol	62.57	81.75
KRH35309	Soybean	cytosol	62.57	81.75
GSMUA_Achr4P29400_001	Banana	cytosol	43.58	79.59
CDY50194	Canola	cytosol	93.85	78.87
CDY72027	Canola	cytosol	46.93	78.5
CDY31586	Canola	cytosol	54.19	73.48
CDX90057	Canola	cytosol	54.19	72.93
CDY15154	Canola	cytosol	58.66	70.0
CDX71067	Canola	cytosol	50.84	68.94
CDX88730	Canola	cytosol	59.22	68.83
CDX71068	Canola	cytosol	59.78	65.24
CDY09242	Canola	cytosol	54.75	64.05
CDX99133	Canola	cytosol, plastid	55.87	59.88
CDY38025	Canola	cytosol	58.66	59.66
CDX86048	Canola	cytosol, plastid	55.31	59.28
CDY24750	Canola	cytosol	47.49	58.22
CDY10786	Canola	cytosol	45.81	56.16
CDX89737	Canola	cytosol	42.46	53.15
CDX75477	Canola	cytosol	35.2	52.07
CDY02247	Canola	cytosol	41.34	51.75
CDY40654	Canola	cytosol	35.2	51.22
CDY02249	Canola	cytosol	18.44	50.77
CDX88731	Canola	cytosol, plastid	54.75	49.25
CDX72508	Canola	cytosol	37.43	48.91
CDX69101	Canola	cytosol	38.55	48.59
CDX80216	Canola	cytosol	58.1	41.27
CDY07204	Canola	cytosol	56.98	37.64
CDY51146	Canola	cytosol, mitochondrion	58.1	29.55

Protein Annotations

MapMan:20.2.2.8	Gene3D:3.40.20.10	GO:A0A078DTW5	InterPro:ADF-H	InterPro:ADF-H/Gelsolin-like_dom_sf	InterPro:ADF/Cofilin
EnsemblPlants:CDX92721	ProteinID:CDX92721	ProteinID:CDX92721.1	GO:GO:0003674	GO:GO:0003779	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005856	GO:GO:0008150
GO:GO:0009987	GO:GO:0015629	GO:GO:0016043	GO:GO:0030042	EnsemblPlantsGene:GSBRNA2T00154540001	InterPro:IPR002108
InterPro:IPR029006	PFAM:PF00241	PFscan:PS51263	PANTHER:PTHR11913	PANTHER:PTHR11913:SF33	SMART:SM00102
SUPFAM:SSF55753	UniParc:UPI0004EEA792	:	:	:	:

Description

BnaC07g39790D

Coordinates

chrLK031873:-:501197..503414

Molecular Weight (calculated)

20828.9 Da

IEP (calculated)

8.620

GRAVY (calculated)

-0.364

Length

179 amino acids

Sequence
(BLAST)

001: MVRRILSTFV FFPLFSRRQS IFTQEKTNLC SSSLSIETEQ KQWFANAASG MAVEDNCKLK FLELKKRTYR FIIFRIDGQQ VVVEKLGNPQ ETYDDFTNSL
101: PADECRYAVF DLDFTTNENC QKSKIFFIAW SPDSSRVRMK MVYASSKDRF KRSLDGIQVE LQATDPSEMS FDIVKSRAL

Best Arabidopsis Sequence Match ( AT4G25590.1 )
(BLAST)

001: MANAASGMAV EDECKLKFLE LKSKRNYRFI IFRIDGQQVV VEKLGNPDET YDDFTASLPA NECRYAVFDF DFITDENCQK SKIFFIAWSP DSSRVRMKMV
101: YASSKDRFKR ELDGIQVELQ ATDPSEMSFD IIKSRAL

Arabidopsis Description

ADF7Actin-depolymerizing factor 7 [Source:UniProtKB/Swiss-Prot;Acc:Q67ZM4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.