CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY52365	Canola	cytosol	98.45	98.45
CDX89411	Canola	cytosol	98.45	98.45
CDY32581	Canola	cytosol	38.76	92.59
CDY31909	Canola	cytosol	92.25	91.54
AT4G25590.1	Thale cress	cytosol	95.35	89.78
CDY54088	Canola	cytosol	65.12	86.6
GSMUA_Achr4P29400_001	Banana	cytosol	62.02	81.63
PGSC0003DMT400037205	Potato	cytosol	86.05	81.02
Solyc03g025750.2.1	Tomato	cytosol	85.27	80.29
KRG91521	Soybean	cytosol	85.27	80.29
KRH35309	Soybean	cytosol	85.27	80.29
CDY31586	Canola	cytosol	77.52	75.76
CDX90057	Canola	cytosol	77.52	75.19
CDY72027	Canola	cytosol	62.02	74.77
CDX71067	Canola	cytosol	72.87	71.21
CDX92721	Canola	mitochondrion	96.9	69.83
CDX88730	Canola	cytosol	79.84	66.88
CDY15154	Canola	cytosol	77.52	66.67
CDX71068	Canola	cytosol	79.84	62.8
CDY09242	Canola	cytosol	72.87	61.44
CDY50194	Canola	cytosol	96.9	58.69
CDY38025	Canola	cytosol	79.07	57.95
CDX99133	Canola	cytosol, plastid	73.64	56.89
CDY24750	Canola	cytosol	64.34	56.85
CDX86048	Canola	cytosol, plastid	72.87	56.29
CDY10786	Canola	cytosol	62.02	54.79
CDX75477	Canola	cytosol	51.16	54.55
CDY40654	Canola	cytosol	51.16	53.66
CDX89737	Canola	cytosol	58.91	53.15
CDY02249	Canola	cytosol	26.36	52.31
CDY02247	Canola	cytosol	57.36	51.75
CDX72508	Canola	cytosol	53.49	50.37
CDX69101	Canola	cytosol	54.26	49.3
CDX88731	Canola	cytosol, plastid	72.87	47.24
CDX80216	Canola	cytosol	77.52	39.68
CDY07204	Canola	cytosol	75.97	36.16
CDY51146	Canola	cytosol, mitochondrion	77.52	28.41

Protein Annotations

MapMan:20.2.2.8	Gene3D:3.40.20.10	GO:A0A078E4S6	InterPro:ADF-H	InterPro:ADF-H/Gelsolin-like_dom_sf	InterPro:ADF/Cofilin
EnsemblPlants:CDX94438	ProteinID:CDX94438	ProteinID:CDX94438.1	GO:GO:0003674	GO:GO:0003779	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005856	GO:GO:0008150
GO:GO:0009987	GO:GO:0015629	GO:GO:0016043	GO:GO:0030042	EnsemblPlantsGene:GSBRNA2T00157583001	InterPro:IPR002108
InterPro:IPR029006	PFAM:PF00241	PFscan:PS51263	PANTHER:PTHR11913	PANTHER:PTHR11913:SF33	SMART:SM00102
SUPFAM:SSF55753	UniParc:UPI0004EE4DBA	:	:	:	:

Description

BnaC01g17460D

Coordinates

chrLK031881:+:1149301..1150416

Molecular Weight (calculated)

15104.0 Da

IEP (calculated)

5.305

GRAVY (calculated)

-0.446

Length

129 amino acids

Sequence
(BLAST)

001: MAVEDNCKLK FLELKKRTYR FIIFRIDGQQ VVVEKLGNPQ ETYDDFTASL PADECRYAVF DFDFTTNENC QKSKIFFIAW SPDSSRVRMK MVYASSKDRF
101: KRELDGIQVE LQATDPSEMS FDIIKSRAL

Best Arabidopsis Sequence Match ( AT4G25590.2 )
(BLAST)

001: MAVEDECKLK FLELKSKRNY RFIIFRIDGQ QVVVEKLGNP DETYDDFTAS LPANECRYAV FDFDFITDEN CQKSKIFFIA WSPDSSRVRM KMVYASSKDR
101: FKRELDGIQV ELQATDPSEM SFDIIKSRAL

Arabidopsis Description

ADF7Actin-depolymerizing factor 7 [Source:UniProtKB/Swiss-Prot;Acc:Q67ZM4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.