CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90057	Canola	cytosol	72.73	96.24
CDY15154	Canola	cytosol	78.41	92.0
AT1G01750.2	Thale cress	cytosol	73.3	88.97
CDY32581	Canola	cytosol	24.43	79.63
CDX94438	Canola	cytosol	57.95	79.07
CDY31909	Canola	cytosol	57.95	78.46
CDX89411	Canola	cytosol	57.39	78.29
CDY52365	Canola	cytosol	56.82	77.52
CDX71067	Canola	cytosol	53.98	71.97
CDY31586	Canola	cytosol	53.41	71.21
CDX88730	Canola	cytosol	59.09	67.53
CDY54088	Canola	cytosol	36.93	67.01
CDY09242	Canola	cytosol	57.39	66.01
CDY72027	Canola	cytosol	38.07	62.62
CDX71068	Canola	cytosol	57.95	62.2
CDX99133	Canola	cytosol, plastid	56.82	59.88
CDX86048	Canola	cytosol, plastid	56.25	59.28
CDX92721	Canola	mitochondrion	59.66	58.66
CDY10786	Canola	cytosol	47.16	56.85
CDY24750	Canola	cytosol	47.16	56.85
CDX89737	Canola	cytosol	42.61	52.45
CDX75477	Canola	cytosol	35.8	52.07
CDX88731	Canola	cytosol, plastid	58.52	51.76
CDY40654	Canola	cytosol	35.8	51.22
CDX72508	Canola	cytosol	39.77	51.09
CDY02247	Canola	cytosol	41.48	51.05
CDY50194	Canola	cytosol	60.23	49.77
CDY02249	Canola	cytosol	18.18	49.23
CDX69101	Canola	cytosol	38.64	47.89
CDY07204	Canola	cytosol	67.61	43.91
CDX80216	Canola	cytosol	57.95	40.48
CDY51146	Canola	cytosol, mitochondrion	69.89	34.94

Protein Annotations

MapMan:20.2.2.8	Gene3D:3.40.20.10	GO:A0A078HHZ6	UniProt:A0A078HHZ6	InterPro:ADF-H	InterPro:ADF-H/Gelsolin-like_dom_sf
InterPro:ADF/Cofilin	EnsemblPlants:CDY38025	ProteinID:CDY38025	ProteinID:CDY38025.1	GO:GO:0003674	GO:GO:0003779
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005856
GO:GO:0008150	GO:GO:0009987	GO:GO:0015629	GO:GO:0016043	GO:GO:0030042	EnsemblPlantsGene:GSBRNA2T00065086001
InterPro:IPR002108	InterPro:IPR029006	PFAM:PF00241	PFscan:PS51263	PANTHER:PTHR11913	PANTHER:PTHR11913:SF30
SMART:SM00102	SUPFAM:SSF55753	UniParc:UPI0004EECDD0	:	:	:

Description

BnaCnng08860DBnaCnng08860D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HHZ6]

Coordinates

chrLK032414:+:146543..147353

Molecular Weight (calculated)

20343.3 Da

IEP (calculated)

5.752

GRAVY (calculated)

-0.579

Length

176 amino acids

Sequence
(BLAST)

001: MDIMKPQLLN HSNDPAQPTS FSLLPPLVSD HQQAENMANS ASGMHVNDEC KLKFLELKAK RNYRFIVFKI DEKAQQVMIE MVGNPEKTYD DFTKCMPENE
101: CRYAVYDFDF TTPENCQKSK IFFIAWSPDT SRVRSKMLYA SSKDRFKREL DGIQVELQAT DPSEMSLDII KGRVNL

Best Arabidopsis Sequence Match ( AT1G01750.1 )
(BLAST)

001: MANSASGMHV SDECKLKFLE LKAKRNYRFI VFKIDEKAQQ VMIDKLGNPE ETYEDFTRSI PEDECRYAVY DYDFTTPENC QKSKIFFIAW SPDTSRVRSK
101: MLYASSKDRF KRELDGIQVE LQATDPSEMS LDIIKGRVNL

Arabidopsis Description

ADF11actin depolymerizing factor 11 [Source:TAIR;Acc:AT1G01750]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.