Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra011575.1-P | Field mustard | cytosol | 100.0 | 100.0 |
| CDX75477 | Canola | cytosol | 85.21 | 100.0 |
| CDY40654 | Canola | cytosol | 82.39 | 95.12 |
| CDX72508 | Canola | cytosol | 90.85 | 94.16 |
| AT4G34970.1 | Thale cress | cytosol | 88.73 | 89.36 |
| KRH29274 | Soybean | cytosol | 73.24 | 78.79 |
| CDX89737 | Canola | cytosol | 78.87 | 78.32 |
| CDY02247 | Canola | cytosol | 78.87 | 78.32 |
| VIT_03s0038g02220.t01 | Wine grape | cytosol | 71.13 | 76.52 |
| KRH24296 | Soybean | cytosol, plastid | 76.76 | 76.22 |
| CDY02249 | Canola | cytosol | 34.51 | 75.38 |
| PGSC0003DMT400015865 | Potato | cytosol | 71.83 | 71.33 |
| KRH51402 | Soybean | cytosol | 71.83 | 71.33 |
| GSMUA_Achr5P18890_001 | Banana | cytosol, plastid | 71.13 | 70.63 |
| Solyc01g111380.2.1 | Tomato | cytosol, plastid | 71.13 | 70.63 |
| GSMUA_Achr11P... | Banana | cytosol, plastid | 68.31 | 67.83 |
| Zm00001d028392_P001 | Maize | cytosol | 67.61 | 67.13 |
| Os03t0243100-01 | Rice | cytosol | 66.9 | 66.43 |
| HORVU4Hr1G063830.6 | Barley | cytosol | 66.9 | 66.43 |
| TraesCS4A01G071400.1 | Wheat | cytosol | 66.2 | 65.73 |
| TraesCS4B01G227300.1 | Wheat | cytosol | 66.2 | 65.73 |
| TraesCS4D01G228100.1 | Wheat | cytosol | 66.2 | 65.73 |
| GSMUA_Achr11P... | Banana | cytosol | 69.01 | 57.99 |
| CDY52365 | Canola | cytosol | 50.0 | 55.04 |
| CDX94438 | Canola | cytosol | 49.3 | 54.26 |
| CDX89411 | Canola | cytosol | 49.3 | 54.26 |
| Zm00001d047942_P001 | Maize | mitochondrion | 65.49 | 54.07 |
| CDX71067 | Canola | cytosol | 50.0 | 53.79 |
| CDY31586 | Canola | cytosol | 50.0 | 53.79 |
| CDY32581 | Canola | cytosol | 20.42 | 53.7 |
| CDY10786 | Canola | cytosol | 53.52 | 52.05 |
| CDX90057 | Canola | cytosol | 48.59 | 51.88 |
| CDY31909 | Canola | cytosol | 47.18 | 51.54 |
| CDY24750 | Canola | cytosol | 52.11 | 50.68 |
| CDY09242 | Canola | cytosol | 52.11 | 48.37 |
| CDX88730 | Canola | cytosol | 52.11 | 48.05 |
| OQU92928 | Sorghum | cytosol, plastid | 68.31 | 47.55 |
| CDY15154 | Canola | cytosol | 49.3 | 46.67 |
| CDY54088 | Canola | cytosol | 31.69 | 46.39 |
| CDX71068 | Canola | cytosol | 52.11 | 45.12 |
| CDY72027 | Canola | cytosol | 33.8 | 44.86 |
| CDX99133 | Canola | cytosol, plastid | 50.7 | 43.11 |
| CDX86048 | Canola | cytosol, plastid | 50.0 | 42.52 |
| CDY38025 | Canola | cytosol | 47.89 | 38.64 |
| CDX92721 | Canola | mitochondrion | 48.59 | 38.55 |
| CDX88731 | Canola | cytosol, plastid | 51.41 | 36.68 |
| CDY50194 | Canola | cytosol | 48.59 | 32.39 |
| CDX80216 | Canola | cytosol | 51.41 | 28.97 |
| CDY07204 | Canola | cytosol | 49.3 | 25.83 |
| CDY51146 | Canola | cytosol, mitochondrion | 48.59 | 19.6 |
Protein Annotations
| MapMan:20.2.2.8 | Gene3D:3.40.20.10 | GO:A0A078BWB4 | InterPro:ADF-H | InterPro:ADF-H/Gelsolin-like_dom_sf | InterPro:ADF/Cofilin |
| EnsemblPlants:CDX69101 | ProteinID:CDX69101 | ProteinID:CDX69101.1 | GO:GO:0003674 | GO:GO:0003779 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005856 | GO:GO:0008150 |
| GO:GO:0009987 | GO:GO:0015629 | GO:GO:0016043 | GO:GO:0030042 | EnsemblPlantsGene:GSBRNA2T00130883001 | InterPro:IPR002108 |
| InterPro:IPR029006 | PFAM:PF00241 | PFscan:PS51263 | PANTHER:PTHR11913 | PANTHER:PTHR11913:SF16 | SMART:SM00102 |
| SUPFAM:SSF55753 | UniParc:UPI0002545502 | : | : | : | : |
Description
BnaC01g03520D
Coordinates
chrLK031789:+:2932576..2933572
Molecular Weight (calculated)
16573.0 Da
IEP (calculated)
8.452
GRAVY (calculated)
-0.504
Length
142 amino acids
Sequence
(BLAST)
(BLAST)
001: MALKTASTNG MWMLEDCKRS FMEMKWKKVH RYIVFKIEEK SKKVAVDKVG AAGETYHDLA ASLPEDDCRY AVFDFDYVTV DNCRMSKLFF ITWSPEASRI
101: REKMMYATSK SGLRRVLEGI HYELQATDPT EMGFDKIQDR TK
101: REKMMYATSK SGLRRVLEGI HYELQATDPT EMGFDKIQDR TK
001: MALKTATSGM WMTDDCKKSF MEMKWKKVHR YVVYKLEEKS RKVTVDKVGA AGESYDDLAA SLPEDDCRYA VFDFDYVTVD NCRMSKIFFI TWSPEASRIR
101: EKMMYATSKS GLRRVLDGVH YELQATDPTE MGFDKIQDRA K
101: EKMMYATSKS GLRRVLDGVH YELQATDPTE MGFDKIQDRA K
Arabidopsis Description
ADF9Actin-depolymerizing factor 9 [Source:UniProtKB/Swiss-Prot;Acc:O49606]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.