Factsheet for Zm00001d047942_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

cytosol 2
mitochondrion 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d028392_P001	Maize	cytosol	80.81	97.2
Os03t0243100-01	Rice	cytosol	77.91	93.71
HORVU4Hr1G063830.6	Barley	cytosol	77.33	93.01
TraesCS4D01G228100.1	Wheat	cytosol	76.16	91.61
TraesCS4B01G227300.1	Wheat	cytosol	75.58	90.91
TraesCS4A01G071400.1	Wheat	cytosol	75.58	90.91
GSMUA_Achr5P18890_001	Banana	cytosol, plastid	66.86	80.42
GSMUA_Achr11P...	Banana	cytosol, plastid	65.12	78.32
KRH24296	Soybean	cytosol, plastid	63.37	76.22
KRH29274	Soybean	cytosol	58.14	75.76
Solyc01g111380.2.1	Tomato	cytosol, plastid	62.21	74.83
PGSC0003DMT400015865	Potato	cytosol	62.21	74.83
VIT_03s0038g02220.t01	Wine grape	cytosol	56.98	74.24
CDY02247	Canola	cytosol	61.63	74.13
CDX89737	Canola	cytosol	61.63	74.13
Bra013058.1-P	Field mustard	cytosol	61.63	74.13
KRH51402	Soybean	cytosol	61.63	74.13
OQU92928	Sorghum	cytosol, plastid	87.79	74.02
AT2G16700.1	Thale cress	cytosol	59.88	72.03
AT4G34970.1	Thale cress	cytosol	56.4	68.79
GSMUA_Achr11P...	Banana	cytosol	67.44	68.64
CDX75477	Canola	cytosol	47.67	67.77
Bra017683.1-P	Field mustard	cytosol	51.74	65.93
CDY40654	Canola	cytosol	47.09	65.85
CDX69101	Canola	cytosol	54.07	65.49
Bra011575.1-P	Field mustard	cytosol	54.07	65.49
CDX72508	Canola	cytosol	51.74	64.96
Zm00001d035625_P001	Maize	cytosol	41.86	54.96
Zm00001d017516_P001	Maize	cytosol	44.19	54.68
Zm00001d035629_P001	Maize	cytosol	44.19	54.68
Zm00001d051388_P001	Maize	cytosol	43.6	53.96
Zm00001d034326_P001	Maize	cytosol	38.95	50.76
Zm00001d013141_P001	Maize	cytosol	41.28	48.97
Zm00001d012966_P001	Maize	plastid	34.88	43.17
Zm00001d034644_P001	Maize	plastid	34.3	42.45
Zm00001d034643_P001	Maize	cytosol	35.47	40.94
Zm00001d029656_P003	Maize	cytosol	44.77	36.67
Zm00001d034024_P001	Maize	cytosol, plastid	30.23	33.77
Zm00001d002714_P003	Maize	cytosol	19.77	19.77

Protein Annotations

EntrezGene:100280108	MapMan:20.2.2.8	Gene3D:3.40.20.10	InterPro:ADF-H	InterPro:ADF-H/Gelsolin-like_dom_sf	InterPro:ADF/Cofilin
ProteinID:AQL08124.1	GO:GO:0003674	GO:GO:0003779	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005856	GO:GO:0008150	GO:GO:0009987	GO:GO:0015629
GO:GO:0016043	GO:GO:0030042	InterPro:IPR002108	InterPro:IPR029006	UniProt:K7VFV9	PFAM:PF00241
PFscan:PS51263	PANTHER:PTHR11913	PANTHER:PTHR11913:SF16	SMART:SM00102	SUPFAM:SSF55753	UniParc:UPI000220A8B2
EnsemblPlantsGene:Zm00001d047942	EnsemblPlants:Zm00001d047942_P001	EnsemblPlants:Zm00001d047942_T001	SEG:seg	:	:

Description

Actin-depolymerizing factor 5

Coordinates

chr9:+:145900630..145902795

Molecular Weight (calculated)

20039.2 Da

IEP (calculated)

9.862

GRAVY (calculated)

-0.505

Length

172 amino acids

Sequence
(BLAST)

001: MRDRIRRQRI PRFRRQGVHP IRDDPQATAM AMAYKMATEG MDVKEECQRW FMEMKWKKVH RFVVYRIDER SRAVLVDRVG GPGEGYEELV AALPGDDCRY
101: AVFDFDFVSV DNCQKSKIFF IAWSPAASRI RAKILYATSK QGLRRLLDGV HYEVQATDPS EMGFDVIRGR AQ

Best Arabidopsis Sequence Match ( AT2G16700.1 )
(BLAST)

001: MAMAFKMATT GMRVTDECTS SFMDMKWKKV HRYIVFKIEE KSRKVTVDKV GGAGESYHDL EDSLPVDDCR YAVFDFDFVT VDNCRKSKIF FIAWSPEASK
101: IRAKILYATS KDGLRRVLEG IHYELQATDP TEMGFDIIQD RAK

Arabidopsis Description

ADF5ATADF5 [Source:UniProtKB/TrEMBL;Acc:A0A178VPY9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.