Factsheet for Zm00001d034326_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d013141_P001	Maize	cytosol	95.45	86.9
EER90794	Sorghum	cytosol	93.18	84.83
Os03t0780400-01	Rice	plastid	91.67	83.45
TraesCS5D01G423800.1	Wheat	golgi	88.64	80.69
TraesCS5A01G416100.1	Wheat	cytosol	87.88	80.0
GSMUA_Achr7P00900_001	Banana	cytosol	74.24	74.24
KRH51874	Soybean	cytosol	65.15	73.5
GSMUA_Achr2P17320_001	Banana	cytosol	78.03	71.03
VIT_05s0049g00980.t01	Wine grape	cytosol	74.24	68.53
GSMUA_Achr7P16650_001	Banana	cytosol	48.48	66.67
AT2G31200.1	Thale cress	cytosol	73.48	66.44
VIT_07s0005g03310.t01	Wine grape	cytosol	71.97	66.43
Solyc09g072590.2.1	Tomato	cytosol	72.73	66.21
GSMUA_Achr2P13120_001	Banana	cytosol	71.97	65.52
KRH67374	Soybean	cytosol	71.97	65.07
KRH34385	Soybean	cytosol	72.73	64.86
Bra018268.1-P	Field mustard	mitochondrion	71.21	64.38
CDY10786	Canola	cytosol	71.21	64.38
KRG92420	Soybean	cytosol	71.97	64.19
KRG95660	Soybean	cytosol	70.45	63.7
CDY24750	Canola	cytosol	69.7	63.01
PGSC0003DMT400044218	Potato	cytosol	68.18	62.07
Solyc09g090110.2.1	Tomato	cytosol	68.18	62.07
HORVU5Hr1G100770.1	Barley	cytosol, plastid	88.64	58.5
PGSC0003DMT400026656	Potato	mitochondrion	71.97	52.49
Zm00001d051388_P001	Maize	cytosol	53.79	51.08
Zm00001d035629_P001	Maize	cytosol	53.79	51.08
Zm00001d035625_P001	Maize	cytosol	50.0	50.38
Zm00001d034024_P001	Maize	cytosol, plastid	58.33	50.0
Zm00001d017516_P001	Maize	cytosol	52.27	49.64
Zm00001d028392_P001	Maize	cytosol	53.03	48.95
Zm00001d034644_P001	Maize	plastid	47.73	45.32
Solyc09g072600.1.1	Tomato	cytosol	16.67	44.9
Zm00001d012966_P001	Maize	plastid	46.97	44.6
Zm00001d047942_P001	Maize	mitochondrion	50.76	38.95
Zm00001d034643_P001	Maize	cytosol	39.39	34.9
Zm00001d029656_P003	Maize	cytosol	55.3	34.76
Zm00001d002714_P003	Maize	cytosol	25.76	19.77

Protein Annotations

MapMan:20.2.2.8	Gene3D:3.40.20.10	UniProt:A0A1D6L6N9	InterPro:ADF-H	InterPro:ADF-H/Gelsolin-like_dom_sf	InterPro:ADF/Cofilin
GO:GO:0003674	GO:GO:0003779	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005856	GO:GO:0008150	GO:GO:0009987	GO:GO:0015629	GO:GO:0016043
GO:GO:0030042	InterPro:IPR002108	InterPro:IPR029006	ProteinID:ONM09963.1	PFAM:PF00241	PFscan:PS51263
PANTHER:PTHR11913	PANTHER:PTHR11913:SF26	SMART:SM00102	SUPFAM:SSF55753	UniParc:UPI000843BE62	EnsemblPlantsGene:Zm00001d034326
EnsemblPlants:Zm00001d034326_P001	EnsemblPlants:Zm00001d034326_T001	:	:	:	:

Description

Actin-depolymerizing factor 6

Coordinates

chr1:+:289335287..289336551

Molecular Weight (calculated)

15621.7 Da

IEP (calculated)

8.404

GRAVY (calculated)

-0.448

Length

132 amino acids

Sequence
(BLAST)

001: MGVALKIRET FVELQMKKAF RYVIFKIEEK QKQVVVEKTG ATTKNYDDFL ASLLENDCRY ALYDFDFVTR ENVQKSKIFF IAWSPSTSRI RAKMLYSTSK
101: DRIKYELDGF HYEIQATDPS EVDIEVLRER AH

Best Arabidopsis Sequence Match ( AT2G31200.1 )
(BLAST)

001: MSFRGLSRPN AISGMGVADE SKTTFLELQR KKTHRYVVFK IDESKKEVVV EKTGNPTESY DDFLASLPDN DCRYAVYDFD FVTSENCQKS KIFFFAWSPS
101: TSGIRAKVLY STSKDQLSRE LQGIHYEIQA TDPTEVDLEV LRERAN

Arabidopsis Description

ADF6Actin-depolymerizing factor 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZSK2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.