Factsheet for Zm00001d029656_P003

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G197600.1	Wheat	cytosol	64.29	90.0
TraesCS1D01G186600.1	Wheat	cytosol	63.81	88.74
Os10t0521100-01	Rice	cytosol	63.33	88.08
TraesCS1A01G183100.2	Wheat	cytosol	64.76	87.74
HORVU1Hr1G048450.4	Barley	cytosol	64.76	86.08
KXG39048	Sorghum	plastid	70.95	78.84
KRH51874	Soybean	cytosol	38.57	69.23
VIT_05s0049g00980.t01	Wine grape	cytosol	42.38	62.24
VIT_07s0005g03310.t01	Wine grape	cytosol	41.9	61.54
KRH67374	Soybean	cytosol	42.38	60.96
KRH34385	Soybean	cytosol	42.86	60.81
KRG92420	Soybean	cytosol	42.38	60.14
KRG95660	Soybean	cytosol	41.43	59.59
Solyc09g090110.2.1	Tomato	cytosol	40.95	59.31
Solyc09g072590.2.1	Tomato	cytosol	40.95	59.31
PGSC0003DMT400044218	Potato	cytosol	40.95	59.31
AT2G31200.1	Thale cress	cytosol	40.0	57.53
Bra018268.1-P	Field mustard	mitochondrion	39.05	56.16
CDY10786	Canola	cytosol	39.05	56.16
Zm00001d034326_P001	Maize	cytosol	34.76	55.3
CDY24750	Canola	cytosol	38.1	54.79
Zm00001d028392_P001	Maize	cytosol	36.67	53.85
Zm00001d013141_P001	Maize	cytosol	36.19	52.41
PGSC0003DMT400026656	Potato	mitochondrion	42.86	49.72
Zm00001d051388_P001	Maize	cytosol	32.86	49.64
Solyc09g072600.1.1	Tomato	cytosol	11.43	48.98
Zm00001d017516_P001	Maize	cytosol	31.9	48.2
Zm00001d035629_P001	Maize	cytosol	30.95	46.76
Zm00001d035625_P001	Maize	cytosol	29.05	46.56
Zm00001d047942_P001	Maize	mitochondrion	36.67	44.77
Zm00001d034644_P001	Maize	plastid	27.62	41.73
Zm00001d012966_P001	Maize	plastid	27.14	41.01
Zm00001d034643_P001	Maize	cytosol	28.1	39.6
Os07t0297500-00	Rice	cytosol	40.95	37.07
Zm00001d034024_P001	Maize	cytosol, plastid	21.43	29.22
Zm00001d002714_P003	Maize	cytosol	17.14	20.93

Protein Annotations

EntrezGene:100285480	MapMan:20.2.2.8	Gene3D:3.40.20.10	UniProt:A0A1D6K6W9	InterPro:ADF-H	InterPro:ADF-H/Gelsolin-like_dom_sf
InterPro:ADF/Cofilin	GO:GO:0003674	GO:GO:0003779	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005856	GO:GO:0008150	GO:GO:0009987	GO:GO:0015629
GO:GO:0016043	GO:GO:0030042	InterPro:IPR002108	InterPro:IPR029006	ProteinID:ONL99307.1	PFAM:PF00241
PFscan:PS51263	PANTHER:PTHR11913	PANTHER:PTHR11913:SF25	SMART:SM00102	SUPFAM:SSF55753	UniParc:UPI00084395F2
EnsemblPlantsGene:Zm00001d029656	EnsemblPlants:Zm00001d029656_P003	EnsemblPlants:Zm00001d029656_T003	SEG:seg	:	:

Description

Actin-depolymerizing factor

Coordinates

chr1:-:81672414..81676391

Molecular Weight (calculated)

22735.0 Da

IEP (calculated)

5.896

GRAVY (calculated)

-0.627

Length

210 amino acids

Sequence
(BLAST)

001: MHTHLTTHHR RGEADDPRGN ESAAAAATSP GNGAGTDAAA SAASASTPAA STSAAGAASR LGAGAEDEKG GGSPAWIDVP ERSKSAFMEL KRRKVHRYVI
101: FKIDDSREEV VVDKIGAPGE SYDDFTASLP TDDCRYAVYD LDFVSDDNCR KSKIFFISWS PSDSRIRAKT IYAVSRNQFR HELDGVHFEI QATDPDDMNL
201: EVLRGRANRT

Best Arabidopsis Sequence Match ( AT2G31200.1 )
(BLAST)

001: MSFRGLSRPN AISGMGVADE SKTTFLELQR KKTHRYVVFK IDESKKEVVV EKTGNPTESY DDFLASLPDN DCRYAVYDFD FVTSENCQKS KIFFFAWSPS
101: TSGIRAKVLY STSKDQLSRE LQGIHYEIQA TDPTEVDLEV LRERAN

Arabidopsis Description

ADF6Actin-depolymerizing factor 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZSK2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.