Factsheet for Os07t0297500-00

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol, nucleus
PProwler:	secretory
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os10t0521100-01	Rice	cytosol	40.52	62.25
TraesCS1B01G197600.1	Wheat	cytosol	37.07	57.33
TraesCS1D01G186600.1	Wheat	cytosol	37.07	56.95
TraesCS1A01G183100.2	Wheat	cytosol	37.07	55.48
HORVU1Hr1G048450.4	Barley	cytosol	36.64	53.8
KXG39048	Sorghum	plastid	39.22	48.15
KRH51874	Soybean	cytosol	24.14	47.86
Solyc09g072590.2.1	Tomato	cytosol	27.59	44.14
VIT_07s0005g03310.t01	Wine grape	cytosol	27.16	44.06
VIT_05s0049g00980.t01	Wine grape	cytosol	27.16	44.06
KRH67374	Soybean	cytosol	27.59	43.84
KRH34385	Soybean	cytosol	27.59	43.24
Solyc09g072600.1.1	Tomato	cytosol	9.05	42.86
Solyc09g090110.2.1	Tomato	cytosol	26.72	42.76
PGSC0003DMT400044218	Potato	cytosol	26.72	42.76
KRG92420	Soybean	cytosol	27.16	42.57
AT2G31200.1	Thale cress	cytosol	26.72	42.47
KRG95660	Soybean	cytosol	26.72	42.47
Bra018268.1-P	Field mustard	mitochondrion	26.72	42.47
CDY10786	Canola	cytosol	26.29	41.78
CDY24750	Canola	cytosol	25.86	41.1
Os07t0484200-01	Rice	plasma membrane	24.57	41.01
Zm00001d029656_P003	Maize	cytosol	37.07	40.95
Os12t0628100-01	Rice	extracellular	25.43	40.69
Os04t0555700-01	Rice	plasma membrane	22.84	38.13
Os03t0780400-01	Rice	plastid	23.71	37.93
Os03t0243100-01	Rice	cytosol	22.84	37.06
PGSC0003DMT400026656	Potato	mitochondrion	28.02	35.91
Os05t0113400-01	Rice	cytosol, extracellular, plastid	21.12	35.51
Os03t0820600-01	Rice	cytosol, extracellular, plastid	20.26	33.81
Os03t0820500-01	Rice	plastid	21.55	33.33

Protein Annotations

MapMan:20.2.2.8	Gene3D:3.40.20.10	UniProt:A0A0P0X4W9	InterPro:ADF-H	InterPro:ADF-H/Gelsolin-like_dom_sf	InterPro:ADF/Cofilin
ProteinID:BAT01069.1	GO:GO:0003674	GO:GO:0003779	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005856	GO:GO:0008150	GO:GO:0009987	GO:GO:0015629
GO:GO:0016043	GO:GO:0030042	InterPro:IPR002108	InterPro:IPR029006	EnsemblPlantsGene:Os07g0297500	EnsemblPlants:Os07t0297500-00
PFAM:PF00241	PFscan:PS51263	PANTHER:PTHR11913	PANTHER:PTHR11913:SF25	SMART:SM00102	SUPFAM:SSF55753
UniParc:UPI000393BC1D	SEG:seg	:	:	:	:

Description

actin depolymerizing factor 8Similar to 001-125-G01, full insert sequence. (Os07t0297500-00)

Coordinates

chr7:-:11645020..11645718

Molecular Weight (calculated)

26782.0 Da

IEP (calculated)

8.303

GRAVY (calculated)

-0.128

Length

232 amino acids

Sequence
(BLAST)

001: GGGSPAWIEV PEKSKSAFWE LMRRKVHRYV IFKIDDRREE IVVEKTGAPW ESYDDFTASL PADAVYDLDF VSDDNCRKSK IFFISWLVFL CPCFSSLSAS
101: LLGALGWRLA CCLVSVSVFC GNSELVKQLN SVHCEFVTYQ MRYCYTFLIH RINWSTPNTN NRPFPVKNKN KKRPFIARIY IYKATYLLSS LTNDMLSSEM
201: YWRTAGSVVF SSYSSLTNDI LMCSDKQQTQ FD

Best Arabidopsis Sequence Match ( AT2G31200.1 )
(BLAST)

001: MSFRGLSRPN AISGMGVADE SKTTFLELQR KKTHRYVVFK IDESKKEVVV EKTGNPTESY DDFLASLPDN DCRYAVYDFD FVTSENCQKS KIFFFAWSPS
101: TSGIRAKVLY STSKDQLSRE LQGIHYEIQA TDPTEVDLEV LRERAN

Arabidopsis Description

ADF6Actin-depolymerizing factor 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZSK2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.