Factsheet for Os07t0484200-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

plasma membrane: 28056797

msms PMID: 28056797 doi

N Yang, T Wang

Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G227300.1	Wheat	cytosol	86.33	86.33
TraesCS2B01G255200.1	Wheat	cytosol	86.33	86.33
TraesCS2D01G235200.1	Wheat	cytosol	86.33	86.33
HORVU2Hr1G053570.1	Barley	cytosol	85.61	85.61
EER97221	Sorghum	cytosol	84.17	84.17
HORVU2Hr1G053580.1	Barley	mitochondrion	84.89	77.12
Os04t0555700-01	Rice	plasma membrane	73.38	73.38
Os05t0113400-01	Rice	cytosol, extracellular, plastid	66.91	67.39
Os12t0628100-01	Rice	extracellular	57.55	55.17
Os03t0820600-01	Rice	cytosol, extracellular, plastid	53.96	53.96
Os03t0243100-01	Rice	cytosol	52.52	51.05
Os03t0780400-01	Rice	plastid	53.24	51.03
Os10t0521100-01	Rice	cytosol	54.68	50.33
Os03t0820500-01	Rice	plastid	53.24	49.33
Zm00001d002714_P003	Maize	cytosol	31.65	25.58
Os07t0297500-00	Rice	cytosol	41.01	24.57

Protein Annotations

MapMan:20.2.2.8	Gene3D:3.40.20.10	EntrezGene:4343240	InterPro:ADF-H	InterPro:ADF-H/Gelsolin-like_dom_sf	InterPro:ADF/Cofilin
EMBL:AK072662	ProteinID:BAC16183.1	ProteinID:BAF21562.1	ProteinID:BAT01504.1	GO:GO:0003674	GO:GO:0003779
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005856
GO:GO:0008150	GO:GO:0009987	GO:GO:0015629	GO:GO:0016043	GO:GO:0030042	InterPro:IPR002108
InterPro:IPR029006	EnsemblPlantsGene:Os07g0484200	EnsemblPlants:Os07t0484200-01	PFAM:PF00241	PFscan:PS51263	PANTHER:PTHR11913
PANTHER:PTHR11913:SF23	UniProt:Q8H2P8	SMART:SM00102	SUPFAM:SSF55753	UniParc:UPI00000AD915	RefSeq:XP_015645783.1

Description

actin depolymerizing factor 9Similar to Actin-depolymerizing factor 1 (ADF 1) (ZmABP1) (ZmADF1). (Os07t0484200-01)

Coordinates

chr7:+:17740777..17742290

Molecular Weight (calculated)

16063.0 Da

IEP (calculated)

5.341

GRAVY (calculated)

-0.525

Length

139 amino acids

Sequence
(BLAST)

001: MANSASGLAV NDECKFKFQE LKTRRGFRFI VFKIDDKAME IKVERLGQTA EGYEDFAATL PADECRYAVY DLDFVTDENC QKSKIFFFSW SPDTARTRSK
101: MLYASSKDRF RRELDGIQCE IQATDPSEMS LDIIRARAH

Best Arabidopsis Sequence Match ( AT4G00680.1 )
(BLAST)

001: MANSASGMHV NDECKIKFLE LKAKRTYRFI VFKIDEKAQQ VQIEKLGNPE ETYDDFTSSI PDDECRYAVY DFDFTTEDNC QKSKIFFIAW SPDTSRVRSK
101: MLYASSKDRF KREMEGIQVE LQATDPSEMS LDIIKGRLNL

Arabidopsis Description

ADF8actin depolymerizing factor 8 [Source:TAIR;Acc:AT4G00680]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.