Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G053570.1 | Barley | cytosol | 90.2 | 99.28 |
| TraesCS2A01G227300.1 | Wheat | cytosol | 88.24 | 97.12 |
| TraesCS2B01G255200.1 | Wheat | cytosol | 87.58 | 96.4 |
| TraesCS2D01G235200.1 | Wheat | cytosol | 87.58 | 96.4 |
| Os07t0484200-01 | Rice | plasma membrane | 77.12 | 84.89 |
| EER97221 | Sorghum | cytosol | 73.86 | 81.3 |
| HORVU0Hr1G000200.1 | Barley | cytosol | 58.82 | 64.75 |
| HORVU4Hr1G063830.6 | Barley | cytosol | 44.44 | 47.55 |
| HORVU1Hr1G048450.4 | Barley | cytosol | 46.41 | 44.94 |
| HORVU5Hr1G113010.1 | Barley | cytosol, plastid | 41.83 | 43.54 |
| HORVU2Hr1G097130.3 | Barley | cytosol | 45.75 | 37.04 |
| HORVU5Hr1G100770.1 | Barley | cytosol, plastid | 48.37 | 37.0 |
| HORVU5Hr1G045750.1 | Barley | cytosol | 42.48 | 36.52 |
| HORVU5Hr1G045770.1 | Barley | plastid | 41.18 | 34.81 |
| HORVU5Hr1G113020.2 | Barley | cytosol | 19.61 | 28.85 |
| HORVU5Hr1G113060.1 | Barley | mitochondrion | 41.83 | 28.57 |
Protein Annotations
| MapMan:20.2.2.8 | Gene3D:3.40.20.10 | UniProt:A0A287I109 | InterPro:ADF-H | InterPro:ADF-H/Gelsolin-like_dom_sf | InterPro:ADF/Cofilin |
| GO:GO:0003674 | GO:GO:0003779 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005856 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0015629 | GO:GO:0016043 |
| GO:GO:0030042 | EnsemblPlantsGene:HORVU2Hr1G053580 | EnsemblPlants:HORVU2Hr1G053580.1 | InterPro:IPR002108 | InterPro:IPR029006 | PFAM:PF00241 |
| PFscan:PS51263 | PANTHER:PTHR11913 | PANTHER:PTHR11913:SF23 | SMART:SM00102 | SUPFAM:SSF55753 | UniParc:UPI000B46633B |
Description
No Description!
Coordinates
chrchr2H:+:328238620..328243742
Molecular Weight (calculated)
17625.8 Da
IEP (calculated)
8.106
GRAVY (calculated)
-0.558
Length
153 amino acids
Sequence
(BLAST)
(BLAST)
001: SLSXRFYTSC RGLCRANSAS GLAVHDDCKI KFSDLKARRS FRFIVFKIDE KTMEIKVERL GETSYGYEEF TNSLPANECR YAVYDLDFVT DENCQKSKIF
101: FFSWSPDTAR TRSKMLYASS KDRFRREMDG IQCEIQATDP SEMSLDIIKG RAH
101: FFSWSPDTAR TRSKMLYASS KDRFRREMDG IQCEIQATDP SEMSLDIIKG RAH
001: MTTCVCVCVV QANSASGMHV NDECKIKFLE LKAKRTYRFI VFKIDEKAQQ VQIEKLGNPE ETYDDFTSSI PDDECRYAVY DFDFTTEDNC QKSKIFFIAW
101: SPDTSRVRSK MLYASSKDRF KREMEGIQVE LQATDPSEMS LDIIKGRLNL
101: SPDTSRVRSK MLYASSKDRF KREMEGIQVE LQATDPSEMS LDIIKGRLNL
Arabidopsis Description
ADF8actin depolymerizing factor 8 [Source:TAIR;Acc:AT4G00680]
SUBAcon: [extracellular,cytosol]
SUBAcon: [extracellular,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.