Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G478800.1 | Wheat | cytosol | 63.46 | 44.9 |
| TraesCS5B01G491800.1 | Wheat | cytosol | 62.5 | 44.22 |
| TraesCS5D01G492300.1 | Wheat | cytosol | 61.54 | 43.54 |
| HORVU5Hr1G045750.1 | Barley | cytosol | 64.42 | 37.64 |
| Zm00001d034643_P001 | Maize | cytosol | 51.92 | 36.24 |
| Os03t0820500-01 | Rice | plastid | 50.96 | 35.33 |
| HORVU0Hr1G000200.1 | Barley | cytosol | 41.35 | 30.94 |
| HORVU5Hr1G045770.1 | Barley | plastid | 50.0 | 28.73 |
| HORVU4Hr1G063830.6 | Barley | cytosol | 38.46 | 27.97 |
| KXG37257 | Sorghum | cytosol, plastid | 50.0 | 24.64 |
| HORVU5Hr1G113060.1 | Barley | mitochondrion | 50.0 | 23.21 |
| HORVU2Hr1G053570.1 | Barley | cytosol | 29.81 | 22.3 |
| HORVU5Hr1G113010.1 | Barley | cytosol, plastid | 28.85 | 20.41 |
| HORVU1Hr1G048450.4 | Barley | cytosol | 29.81 | 19.62 |
| HORVU2Hr1G053580.1 | Barley | mitochondrion | 28.85 | 19.61 |
| HORVU2Hr1G097130.3 | Barley | cytosol | 29.81 | 16.4 |
| HORVU5Hr1G100770.1 | Barley | cytosol, plastid | 30.77 | 16.0 |
Protein Annotations
| MapMan:20.2.2.8 | Gene3D:3.40.20.10 | UniProt:A0A287SRV4 | InterPro:ADF-H | InterPro:ADF-H/Gelsolin-like_dom_sf | InterPro:ADF/Cofilin |
| GO:GO:0003674 | GO:GO:0003779 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005856 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0015629 | GO:GO:0016043 |
| GO:GO:0030042 | EnsemblPlantsGene:HORVU5Hr1G113020 | EnsemblPlants:HORVU5Hr1G113020.2 | InterPro:IPR002108 | InterPro:IPR029006 | PFAM:PF00241 |
| PFscan:PS51263 | PANTHER:PTHR11913 | PANTHER:PTHR11913:SF51 | SUPFAM:SSF55753 | UniParc:UPI000B48077B | SEG:seg |
Description
No Description!
Coordinates
chrchr5H:-:640765749..640767035
Molecular Weight (calculated)
10941.9 Da
IEP (calculated)
11.793
GRAVY (calculated)
-0.444
Length
104 amino acids
Sequence
(BLAST)
(BLAST)
001: MANAVSGVAV SEECVRAFQE LRAGRAHRFV VYKMDDAVHR VVVDKVGGRD AGFDDLAAAL PPTTAATPST TSTSPSATPP PKAPTGRRPA ARSSSSPGRR
101: RVRR
101: RVRR
001: MALKTATSGM WMTDDCKKSF MEMKWKKVHR YVVYKLEEKS RKVTVDKVGA AGESYDDLAA SLPEDDCRYA VFDFDYVTVD NCRMSKIFFI TWSPEASRIR
101: EKMMYATSKS GLRRVLDGVH YELQATDPTE MGFDKIQDRA K
101: EKMMYATSKS GLRRVLDGVH YELQATDPTE MGFDKIQDRA K
Arabidopsis Description
ADF9Actin-depolymerizing factor 9 [Source:UniProtKB/Swiss-Prot;Acc:O49606]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.