CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d034643_P001	Maize	cytosol	60.66	85.91
Os03t0820500-01	Rice	plastid	55.45	78.0
TraesCS5B01G491800.1	Wheat	cytosol	51.18	73.47
TraesCS5A01G478800.1	Wheat	cytosol	51.18	73.47
TraesCS5D01G492300.1	Wheat	cytosol	50.71	72.79
TraesCS5B01G491500.1	Wheat	cytosol	43.6	64.79
HORVU5Hr1G045750.1	Barley	cytosol	54.03	64.04
HORVU5Hr1G045770.1	Barley	plastid	47.87	55.8
EER95084	Sorghum	cytosol	35.55	53.96
EES17589	Sorghum	cytosol	35.07	53.24
EER97221	Sorghum	cytosol	35.07	53.24
EES12628	Sorghum	cytosol	34.12	51.8
EES05762	Sorghum	cytosol	34.12	51.8
HORVU5Hr1G113020.2	Barley	cytosol	24.64	50.0
KXG37255	Sorghum	cytosol	32.7	49.64
HORVU5Hr1G113060.1	Barley	mitochondrion	49.76	46.88
TraesCS5A01G478500.1	Wheat	mitochondrion	44.08	46.5
EER90794	Sorghum	cytosol	28.91	42.07
TraesCS5D01G491900.1	Wheat	plastid	46.45	41.7
OQU92928	Sorghum	cytosol, plastid	34.6	35.78
KXG39048	Sorghum	plastid	31.28	34.92

Protein Annotations

MapMan:20.2.2.8	Gene3D:3.40.20.10	EntrezGene:8057046	UniProt:A0A1B6QH80	InterPro:ADF-H	InterPro:ADF-H/Gelsolin-like_dom_sf
InterPro:ADF/Cofilin	GO:GO:0003674	GO:GO:0003779	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005856	GO:GO:0008150	GO:GO:0009987	GO:GO:0015629
GO:GO:0016043	GO:GO:0030042	InterPro:IPR002108	InterPro:IPR029006	EnsemblPlants:KXG37257	ProteinID:KXG37257
ProteinID:KXG37257.1	PFAM:PF00241	PFscan:PS51263	PANTHER:PTHR11913	PANTHER:PTHR11913:SF51	SMART:SM00102
EnsemblPlantsGene:SORBI_3001G034900	SUPFAM:SSF55753	unigene:Sbi.598	UniParc:UPI00081ADB47	:	:

Description

hypothetical protein

Coordinates

chr1:-:2635378..2636397

Molecular Weight (calculated)

22828.7 Da

IEP (calculated)

4.892

GRAVY (calculated)

-0.136

Length

211 amino acids

Sequence
(BLAST)

001: MGSHTQPLST DTATHCYLQS SKPVYCDVEL TRMVRALWTL DSQSGLCRST FSFPQLLHGG CTALQANAAS GVAVAEECVA RFQELRGGRA HRFVVFKVDD
101: ALQRVVVDKV GERGAGFGDL TASLPADDCR YAVYDHDFTV EDATATGEAQ AAPRSKIFFV AWSPEAAAVR SKMVYASSCD GFRKELDGVQ VDLQATEPSE
201: LTLDVLNDHA S

Best Arabidopsis Sequence Match ( AT1G01750.1 )
(BLAST)

001: MANSASGMHV SDECKLKFLE LKAKRNYRFI VFKIDEKAQQ VMIDKLGNPE ETYEDFTRSI PEDECRYAVY DYDFTTPENC QKSKIFFIAW SPDTSRVRSK
101: MLYASSKDRF KRELDGIQVE LQATDPSEMS LDIIKGRVNL

Arabidopsis Description

ADF11actin depolymerizing factor 11 [Source:TAIR;Acc:AT1G01750]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.