CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os10t0521100-01	Rice	cytosol	75.66	94.7
TraesCS1B01G197600.1	Wheat	cytosol	74.07	93.33
TraesCS1D01G186600.1	Wheat	cytosol	74.07	92.72
HORVU1Hr1G048450.4	Barley	cytosol	74.07	88.61
TraesCS1A01G183100.2	Wheat	cytosol	71.43	87.1
Zm00001d029656_P003	Maize	cytosol	78.84	70.95
KRH51874	Soybean	cytosol	43.92	70.94
VIT_05s0049g00980.t01	Wine grape	cytosol	48.68	64.34
VIT_07s0005g03310.t01	Wine grape	cytosol	48.15	63.64
KRH67374	Soybean	cytosol	48.68	63.01
KRH34385	Soybean	cytosol	49.21	62.84
KRG92420	Soybean	cytosol	48.68	62.16
KRG95660	Soybean	cytosol	47.62	61.64
Solyc09g072590.2.1	Tomato	cytosol	47.09	61.38
Solyc09g090110.2.1	Tomato	cytosol	46.56	60.69
PGSC0003DMT400044218	Potato	cytosol	46.56	60.69
Bra018268.1-P	Field mustard	mitochondrion	45.5	58.9
AT2G31200.1	Thale cress	cytosol	45.5	58.9
CDY10786	Canola	cytosol	44.97	58.22
CDY24750	Canola	cytosol	43.92	56.85
EER90794	Sorghum	cytosol	42.33	55.17
EER97221	Sorghum	cytosol	38.1	51.8
EES05762	Sorghum	cytosol	37.04	50.36
PGSC0003DMT400026656	Potato	mitochondrion	47.62	49.72
EES17589	Sorghum	cytosol	36.51	49.64
EER95084	Sorghum	cytosol	36.51	49.64
Solyc09g072600.1.1	Tomato	cytosol	12.7	48.98
EES12628	Sorghum	cytosol	34.92	47.48
Os07t0297500-00	Rice	cytosol	48.15	39.22
KXG37255	Sorghum	cytosol	28.57	38.85
OQU92928	Sorghum	cytosol, plastid	41.27	38.24
KXG37257	Sorghum	cytosol, plastid	34.92	31.28

Protein Annotations

MapMan:20.2.2.8	Gene3D:3.40.20.10	EntrezGene:8063189	UniProt:A0A1B6QM99	InterPro:ADF-H	InterPro:ADF-H/Gelsolin-like_dom_sf
InterPro:ADF/Cofilin	GO:GO:0003674	GO:GO:0003779	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005856	GO:GO:0008150	GO:GO:0009987	GO:GO:0015629
GO:GO:0016043	GO:GO:0030042	InterPro:IPR002108	InterPro:IPR029006	EnsemblPlants:KXG39048	ProteinID:KXG39048
ProteinID:KXG39048.1	PFAM:PF00241	PFscan:PS51263	PANTHER:PTHR11913	PANTHER:PTHR11913:SF25	SMART:SM00102
EnsemblPlantsGene:SORBI_3001G322400	SUPFAM:SSF55753	UniParc:UPI00081AE138	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:60971034..60972992

Molecular Weight (calculated)

21377.3 Da

IEP (calculated)

8.072

GRAVY (calculated)

-0.447

Length

189 amino acids

Sequence
(BLAST)

001: MGESPCLISS TINTTRRPAP AFLARASGRI HIRASVRPAM EVLGFAAMGG GSPAWIDVPE RSKSAFMELK RRKVHRYVIF KIDDRREEIV VEKTGAPGES
101: YDDFTASLPA DDCRYAVYDL DFVSDDNCRK SKIFFISWSP SDSRIRAKTI YAVSRNQFRH ELDGVHFEIQ ATDPDDMDLE VLRGRANRT

Best Arabidopsis Sequence Match ( AT2G31200.1 )
(BLAST)

001: MSFRGLSRPN AISGMGVADE SKTTFLELQR KKTHRYVVFK IDESKKEVVV EKTGNPTESY DDFLASLPDN DCRYAVYDFD FVTSENCQKS KIFFFAWSPS
101: TSGIRAKVLY STSKDQLSRE LQGIHYEIQA TDPTEVDLEV LRERAN

Arabidopsis Description

ADF6Actin-depolymerizing factor 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZSK2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.