CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d012966_P001	Maize	plastid	96.4	96.4
Zm00001d034644_P001	Maize	plastid	96.4	96.4
Os03t0820600-01	Rice	cytosol, extracellular, plastid	74.82	74.82
TraesCS5A01G478900.1	Wheat	golgi, nucleus, plastid, unclear	65.47	65.94
TraesCS5D01G492400.1	Wheat	cytosol	65.47	65.94
EES12628	Sorghum	cytosol	60.43	60.43
EES17589	Sorghum	cytosol	60.43	60.43
EER95084	Sorghum	cytosol	57.55	57.55
EES05762	Sorghum	cytosol	56.83	56.83
EER97221	Sorghum	cytosol	56.12	56.12
HORVU5Hr1G113010.1	Barley	cytosol, plastid	56.83	53.74
EER90794	Sorghum	cytosol	47.48	45.52
KXG37257	Sorghum	cytosol, plastid	49.64	32.7
OQU92928	Sorghum	cytosol, plastid	44.6	30.39
KXG39048	Sorghum	plastid	38.85	28.57

Protein Annotations

MapMan:20.2.2.8	Gene3D:3.40.20.10	UniProt:A0A1B6QH55	InterPro:ADF-H	InterPro:ADF-H/Gelsolin-like_dom_sf	InterPro:ADF/Cofilin
GO:GO:0003674	GO:GO:0003779	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005856	GO:GO:0008150	GO:GO:0009987	GO:GO:0015629	GO:GO:0016043
GO:GO:0030042	InterPro:IPR002108	InterPro:IPR029006	EnsemblPlants:KXG37255	ProteinID:KXG37255	ProteinID:KXG37255.1
PFAM:PF00241	PFscan:PS51263	PANTHER:PTHR11913	PANTHER:PTHR11913:SF50	SMART:SM00102	EnsemblPlantsGene:SORBI_3001G034700
SUPFAM:SSF55753	UniParc:UPI0001FCD07E	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:2632380..2634538

Molecular Weight (calculated)

15957.8 Da

IEP (calculated)

5.287

GRAVY (calculated)

-0.524

Length

139 amino acids

Sequence
(BLAST)

001: MANARSGVAV NDECMLKFGE LQSKRLHRFI TYKMDDKFKE IVVDQVGDRA TSYEDFTNSL PENDCRYAIY DFDFVTAEDV QKSRIFYILW SPDSAKVKSK
101: MLYASSNQKF KSGLNGIQVE LQATDASEIS IDQIKDRAR

Best Arabidopsis Sequence Match ( AT1G01750.1 )
(BLAST)

001: MANSASGMHV SDECKLKFLE LKAKRNYRFI VFKIDEKAQQ VMIDKLGNPE ETYEDFTRSI PEDECRYAVY DYDFTTPENC QKSKIFFIAW SPDTSRVRSK
101: MLYASSKDRF KRELDGIQVE LQATDPSEMS LDIIKGRVNL

Arabidopsis Description

ADF11actin depolymerizing factor 11 [Source:TAIR;Acc:AT1G01750]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.