Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G478900.1 | Wheat | golgi, nucleus, plastid, unclear | 100.0 | 100.0 |
| HORVU5Hr1G113010.1 | Barley | cytosol, plastid | 85.51 | 80.27 |
| Os03t0820600-01 | Rice | cytosol, extracellular, plastid | 69.57 | 69.06 |
| KXG37255 | Sorghum | cytosol | 65.94 | 65.47 |
| Zm00001d012966_P001 | Maize | plastid | 64.49 | 64.03 |
| Zm00001d034644_P001 | Maize | plastid | 64.49 | 64.03 |
| TraesCS6D01G229200.1 | Wheat | cytosol | 56.52 | 56.12 |
| TraesCS2D01G235200.1 | Wheat | cytosol | 54.35 | 53.96 |
| TraesCS5D01G492300.1 | Wheat | cytosol | 50.0 | 46.94 |
| TraesCS5D01G423800.1 | Wheat | golgi | 48.55 | 46.21 |
| TraesCS4D01G228100.1 | Wheat | cytosol | 43.48 | 41.96 |
| TraesCS1D01G186600.1 | Wheat | cytosol | 39.13 | 35.76 |
| TraesCS5D01G491900.1 | Wheat | plastid | 44.2 | 25.96 |
Protein Annotations
| MapMan:20.2.2.8 | Gene3D:3.40.20.10 | InterPro:ADF-H | InterPro:ADF-H/Gelsolin-like_dom_sf | InterPro:ADF/Cofilin | GO:GO:0003674 |
| GO:GO:0003779 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005856 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0015629 | GO:GO:0016043 | GO:GO:0030042 |
| InterPro:IPR002108 | InterPro:IPR029006 | PFAM:PF00241 | PFscan:PS51263 | PANTHER:PTHR11913 | PANTHER:PTHR11913:SF50 |
| SMART:SM00102 | SUPFAM:SSF55753 | EnsemblPlantsGene:TraesCS5D01G492400 | EnsemblPlants:TraesCS5D01G492400.1 | TIGR:cd11286 | : |
Description
No Description!
Coordinates
chr5D:+:525659168..525660643
Molecular Weight (calculated)
16084.9 Da
IEP (calculated)
5.739
GRAVY (calculated)
-0.662
Length
138 amino acids
Sequence
(BLAST)
(BLAST)
001: MANASSGAGI HDDCKLRFVE LKSKRMHRFI TYRLENQKEV IVDQTGEREA TYEDFTKTLP ENDCRFAVFD FDFTTPEDVP KSRIFYIFWS PDTAKVRSKM
101: TYASTNEKFK RTLDGIQIEM QATDPSEISL DVIKERAH
101: TYASTNEKFK RTLDGIQIEM QATDPSEISL DVIKERAH
001: MANSASGMHV SDECKLKFLE LKAKRNYRFI VFKIDEKAQQ VMIDKLGNPE ETYEDFTRSI PEDECRYAVY DYDFTTPENC QKSKIFFIAW SPDTSRVRSK
101: MLYASSKDRF KRELDGIQVE LQATDPSEMS LDIIKGRVNL
101: MLYASSKDRF KRELDGIQVE LQATDPSEMS LDIIKGRVNL
Arabidopsis Description
ADF11actin depolymerizing factor 11 [Source:TAIR;Acc:AT1G01750]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.