Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G247000.1 | Wheat | cytosol | 97.12 | 97.12 |
| EES05762 | Sorghum | cytosol | 94.24 | 94.24 |
| TraesCS6B01G277600.1 | Wheat | cytosol | 97.12 | 93.1 |
| Zm00001d051388_P001 | Maize | cytosol | 92.81 | 92.81 |
| Zm00001d017516_P001 | Maize | cytosol | 90.65 | 90.65 |
| GSMUA_Achr11P... | Banana | cytosol | 79.86 | 84.09 |
| VIT_16s0050g00220.t01 | Wine grape | cytosol | 79.86 | 84.09 |
| GSMUA_Achr11P... | Banana | cytosol | 79.14 | 83.33 |
| TraesCS2D01G235200.1 | Wheat | cytosol | 73.38 | 73.38 |
| Solyc01g094400.2.1 | Tomato | unclear | 71.22 | 72.26 |
| PGSC0003DMT400000464 | Potato | cytosol | 71.22 | 72.26 |
| Solyc10g017550.2.1 | Tomato | unclear | 70.5 | 70.5 |
| PGSC0003DMT400026582 | Potato | mitochondrion | 70.5 | 70.5 |
| TraesCS5D01G423800.1 | Wheat | golgi | 59.71 | 57.24 |
| TraesCS5D01G492400.1 | Wheat | cytosol | 56.12 | 56.52 |
| GSMUA_Achr2P11510_001 | Banana | cytosol | 85.61 | 52.19 |
| GSMUA_Achr2P18590_001 | Banana | cytosol | 83.45 | 51.1 |
| TraesCS4D01G228100.1 | Wheat | cytosol | 52.52 | 51.05 |
| TraesCS5D01G492300.1 | Wheat | cytosol | 53.24 | 50.34 |
| TraesCS1D01G186600.1 | Wheat | cytosol | 51.08 | 47.02 |
| VIT_15s0046g03040.t01 | Wine grape | cytosol | 84.17 | 45.7 |
| TraesCS5D01G491900.1 | Wheat | plastid | 52.52 | 31.06 |
Protein Annotations
| MapMan:20.2.2.8 | Gene3D:3.40.20.10 | InterPro:ADF-H | InterPro:ADF-H/Gelsolin-like_dom_sf | InterPro:ADF/Cofilin | GO:GO:0003674 |
| GO:GO:0003779 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005856 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0015629 | GO:GO:0016043 | GO:GO:0030042 |
| InterPro:IPR002108 | InterPro:IPR029006 | PFAM:PF00241 | PFscan:PS51263 | PANTHER:PTHR11913 | PANTHER:PTHR11913:SF31 |
| SMART:SM00102 | SUPFAM:SSF55753 | EnsemblPlantsGene:TraesCS6D01G229200 | EnsemblPlants:TraesCS6D01G229200.1 | TIGR:cd11286 | : |
Description
No Description!
Coordinates
chr6D:+:320228058..320229328
Molecular Weight (calculated)
15998.1 Da
IEP (calculated)
5.346
GRAVY (calculated)
-0.383
Length
139 amino acids
Sequence
(BLAST)
(BLAST)
001: MSNSASGMAV CDECKLKFQE LKAKRSFRFI VFKINEKVQQ VVVDRVGEKT ESYDDFTACL PADECRYAVF DFDFVTDENC QKSKIFFISW APDTSRVRSK
101: MLYASSKDRF KRELDGIQVE LQATDPSEMS MDIIKGRAL
101: MLYASSKDRF KRELDGIQVE LQATDPSEMS MDIIKGRAL
001: MANSASGMHV SDECKLKFLE LKAKRNYRFI VFKIDEKAQQ VMIDKLGNPE ETYEDFTRSI PEDECRYAVY DYDFTTPENC QKSKIFFIAW SPDTSRVRSK
101: MLYASSKDRF KRELDGIQVE LQATDPSEMS LDIIKGRVNL
101: MLYASSKDRF KRELDGIQVE LQATDPSEMS LDIIKGRVNL
Arabidopsis Description
ADF11actin depolymerizing factor 11 [Source:TAIR;Acc:AT1G01750]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.