Factsheet for VIT_15s0046g03040.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
cytosol 4
extracellular 1
golgi 1
plasma membrane 1
endoplasmic reticulum 1
vacuole 1
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	cytosol
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
Predotar:	mitochondrion
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P11370_001	Banana	cytosol	39.45	90.99
GSMUA_Achr11P...	Banana	cytosol	46.48	90.15
VIT_16s0050g00220.t01	Wine grape	cytosol	46.48	90.15
GSMUA_Achr11P...	Banana	cytosol	44.92	87.12
GSMUA_AchrUn_...	Banana	cytosol	44.53	86.36
EES05762	Sorghum	cytosol	45.7	84.17
TraesCS6D01G229200.1	Wheat	cytosol	45.7	84.17
Os04t0555700-01	Rice	plasma membrane	45.7	84.17
GSMUA_Achr1P00290_001	Banana	cytosol	43.36	84.09
TraesCS6A01G247000.1	Wheat	cytosol	44.92	82.73
EES12628	Sorghum	cytosol	44.53	82.01
Zm00001d051388_P001	Maize	cytosol	44.53	82.01
TraesCS2B01G429500.1	Wheat	cytosol	44.14	81.3
Zm00001d017516_P001	Maize	cytosol	44.14	81.3
Solyc01g094400.2.1	Tomato	unclear	42.19	78.83
PGSC0003DMT400000464	Potato	cytosol	42.19	78.83
TraesCS6B01G277600.1	Wheat	cytosol	44.53	78.62
VIT_13s0019g00550.t01	Wine grape	cytosol	42.19	77.7
PGSC0003DMT400026582	Potato	mitochondrion	41.8	76.98
Solyc10g017550.2.1	Tomato	unclear	41.41	76.26
VIT_06s0004g04280.t01	Wine grape	cytosol	43.75	66.67
GSMUA_Achr5P12270_001	Banana	plastid, vacuole	48.83	62.19
VIT_03s0038g02220.t01	Wine grape	cytosol	32.03	62.12
VIT_05s0049g00980.t01	Wine grape	cytosol	33.2	59.44
VIT_08s0040g03360.t01	Wine grape	plastid	43.75	59.26
GSMUA_Achr2P18590_001	Banana	cytosol	52.34	59.03
VIT_07s0005g03310.t01	Wine grape	cytosol	32.42	58.04
GSMUA_Achr2P11510_001	Banana	cytosol	51.17	57.46
VIT_10s0092g00330.t01	Wine grape	cytosol	19.92	56.04
VIT_11s0103g00260.t01	Wine grape	cytosol	25.0	54.24

Protein Annotations

EntrezGene:100258572	wikigene:100258572	MapMan:20.2.2.8	Gene3D:3.40.20.10	InterPro:ADF-H	InterPro:ADF-H/Gelsolin-like_dom_sf
InterPro:ADF/Cofilin	EMBL:AM437718	ProteinID:CAN73839	ProteinID:CAN73839.1	ProteinID:CBI40336	ProteinID:CBI40336.3
UniProt:D7UC71	EMBL:FN596755	GO:GO:0003674	GO:GO:0003779	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005856	GO:GO:0008150	GO:GO:0009987
GO:GO:0015629	GO:GO:0016043	GO:GO:0030042	InterPro:IPR002108	InterPro:IPR029006	EntrezGene:LOC100258572
wikigene:LOC100258572	PFAM:PF00241	PFscan:PS51263	PANTHER:PTHR11913	PANTHER:PTHR11913:SF30	SMART:SM00102
SUPFAM:SSF55753	UniParc:UPI0001BE53EB	ArrayExpress:VIT_15s0046g03040	EnsemblPlantsGene:VIT_15s0046g03040	EnsemblPlants:VIT_15s0046g03040.t01	unigene:Vvi.20136
RefSeq:XP_002271495	RefSeq:XP_002271495.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr15:+:19687801..19689234

Molecular Weight (calculated)

29119.9 Da

IEP (calculated)

8.973

GRAVY (calculated)

-0.332

Length

256 amino acids

Sequence
(BLAST)

001: MVKKAINITK PRKKFNGQIL RPKLLKSGNQ NVATRKCSGG RDQPWINARS ECQPLIFTPT NVSPPFNLFL FSSSSITHFP YALQNLGISL FLLLSDFVGF
101: FFLDHFTEGS SLSGGHNMAN SASGMAVHDE CKLKFLELKA KRNHRFIVFK IDERIQQVMV EKLGSPDETY EDFTNSLPAD ECRYAVFDFD FTTDENCQKS
201: KIFFIAWSPD TSRVRSKMLY ASSKDRFKRE LDGIQVELQA TDPSEMSMDI IKGRAL

Best Arabidopsis Sequence Match ( AT1G01750.1 )
(BLAST)

001: MANSASGMHV SDECKLKFLE LKAKRNYRFI VFKIDEKAQQ VMIDKLGNPE ETYEDFTRSI PEDECRYAVY DYDFTTPENC QKSKIFFIAW SPDTSRVRSK
101: MLYASSKDRF KRELDGIQVE LQATDPSEMS LDIIKGRVNL

Arabidopsis Description

ADF11actin depolymerizing factor 11 [Source:TAIR;Acc:AT1G01750]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.