Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G229200.1 | Wheat | cytosol | 97.12 | 97.12 |
| TraesCS6B01G277600.1 | Wheat | cytosol | 97.84 | 93.79 |
| EES05762 | Sorghum | cytosol | 93.53 | 93.53 |
| Zm00001d051388_P001 | Maize | cytosol | 92.09 | 92.09 |
| Zm00001d017516_P001 | Maize | cytosol | 88.49 | 88.49 |
| GSMUA_Achr11P... | Banana | cytosol | 80.58 | 84.85 |
| VIT_16s0050g00220.t01 | Wine grape | cytosol | 79.86 | 84.09 |
| GSMUA_Achr11P... | Banana | cytosol | 79.14 | 83.33 |
| TraesCS2A01G227300.1 | Wheat | cytosol | 72.66 | 72.66 |
| Solyc01g094400.2.1 | Tomato | unclear | 71.22 | 72.26 |
| PGSC0003DMT400000464 | Potato | cytosol | 71.22 | 72.26 |
| PGSC0003DMT400026582 | Potato | mitochondrion | 70.5 | 70.5 |
| Solyc10g017550.2.1 | Tomato | unclear | 69.78 | 69.78 |
| TraesCS5A01G416100.1 | Wheat | cytosol | 58.27 | 55.86 |
| TraesCS5A01G478900.1 | Wheat | golgi, nucleus, plastid, unclear | 55.4 | 55.8 |
| GSMUA_Achr2P11510_001 | Banana | cytosol | 84.89 | 51.75 |
| GSMUA_Achr2P18590_001 | Banana | cytosol | 83.45 | 51.1 |
| TraesCS4A01G071400.1 | Wheat | cytosol | 51.8 | 50.35 |
| TraesCS5A01G478800.1 | Wheat | cytosol | 53.24 | 50.34 |
| TraesCS1A01G183100.2 | Wheat | cytosol | 51.08 | 45.81 |
| VIT_15s0046g03040.t01 | Wine grape | cytosol | 82.73 | 44.92 |
| TraesCS5A01G478500.1 | Wheat | mitochondrion | 51.08 | 35.5 |
Protein Annotations
| MapMan:20.2.2.8 | Gene3D:3.40.20.10 | InterPro:ADF-H | InterPro:ADF-H/Gelsolin-like_dom_sf | InterPro:ADF/Cofilin | GO:GO:0003674 |
| GO:GO:0003779 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005856 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0015629 | GO:GO:0016043 | GO:GO:0030042 |
| InterPro:IPR002108 | InterPro:IPR029006 | PFAM:PF00241 | PFscan:PS51263 | PANTHER:PTHR11913 | PANTHER:PTHR11913:SF31 |
| SMART:SM00102 | SUPFAM:SSF55753 | EnsemblPlantsGene:TraesCS6A01G247000 | EnsemblPlants:TraesCS6A01G247000.1 | TIGR:cd11286 | : |
Description
No Description!
Coordinates
chr6A:+:457685821..457687111
Molecular Weight (calculated)
15980.0 Da
IEP (calculated)
6.577
GRAVY (calculated)
-0.429
Length
139 amino acids
Sequence
(BLAST)
(BLAST)
001: MSNSASGMAV SDQCKLKFQE LKAKRSFRFI VFKINEKVQQ VVVDRVGEKN ESYDDFTACL PADECRYAVF DFDFVTDENC QKSKIFFISW APDTSRVRSK
101: MLYASSKDRF KRELDGIQVE LQATDPSEMS MDIVKGRAL
101: MLYASSKDRF KRELDGIQVE LQATDPSEMS MDIVKGRAL
001: MANSASGMHV SDECKLKFLE LKAKRNYRFI VFKIDEKAQQ VMIDKLGNPE ETYEDFTRSI PEDECRYAVY DYDFTTPENC QKSKIFFIAW SPDTSRVRSK
101: MLYASSKDRF KRELDGIQVE LQATDPSEMS LDIIKGRVNL
101: MLYASSKDRF KRELDGIQVE LQATDPSEMS LDIIKGRVNL
Arabidopsis Description
ADF11actin depolymerizing factor 11 [Source:TAIR;Acc:AT1G01750]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.