Factsheet for TraesCS5A01G416100.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G423800.1	Wheat	golgi	98.62	98.62
Os03t0780400-01	Rice	plastid	93.79	93.79
Zm00001d013141_P001	Maize	cytosol	91.03	91.03
EER90794	Sorghum	cytosol	91.03	91.03
Zm00001d034326_P001	Maize	cytosol	80.0	87.88
GSMUA_Achr2P17320_001	Banana	cytosol	79.31	79.31
GSMUA_Achr7P16650_001	Banana	cytosol	52.41	79.17
GSMUA_Achr7P00900_001	Banana	cytosol	68.28	75.0
VIT_05s0049g00980.t01	Wine grape	cytosol	73.1	74.13
VIT_07s0005g03310.t01	Wine grape	cytosol	72.41	73.43
KRH51874	Soybean	cytosol	58.62	72.65
Solyc09g072590.2.1	Tomato	cytosol	72.41	72.41
GSMUA_Achr2P13120_001	Banana	cytosol	71.72	71.72
HORVU5Hr1G100770.1	Barley	cytosol, plastid	98.62	71.5
AT2G31200.1	Thale cress	cytosol	71.03	70.55
KRH34385	Soybean	cytosol	71.72	70.27
Bra018268.1-P	Field mustard	mitochondrion	70.34	69.86
CDY10786	Canola	cytosol	70.34	69.86
KRH67374	Soybean	cytosol	70.34	69.86
KRG92420	Soybean	cytosol	71.03	69.59
CDY24750	Canola	cytosol	69.66	69.18
KRG95660	Soybean	cytosol	69.66	69.18
PGSC0003DMT400044218	Potato	cytosol	67.59	67.59
Solyc09g090110.2.1	Tomato	cytosol	67.59	67.59
Solyc09g072600.1.1	Tomato	cytosol	20.69	61.22
TraesCS6A01G247000.1	Wheat	cytosol	55.86	58.27
PGSC0003DMT400026656	Potato	mitochondrion	71.72	57.46
Zm00001d034024_P001	Maize	cytosol, plastid	56.55	53.25
TraesCS2A01G227300.1	Wheat	cytosol	48.97	51.08
TraesCS1A01G183100.2	Wheat	cytosol	53.79	50.32
TraesCS4A01G071400.1	Wheat	cytosol	47.59	48.25
TraesCS5A01G478900.1	Wheat	golgi, nucleus, plastid, unclear	45.52	47.83
TraesCS5A01G478800.1	Wheat	cytosol	40.69	40.14
TraesCS5A01G478500.1	Wheat	mitochondrion	40.69	29.5

Protein Annotations

MapMan:20.2.2.8	Gene3D:3.40.20.10	InterPro:ADF-H	InterPro:ADF-H/Gelsolin-like_dom_sf	InterPro:ADF/Cofilin	GO:GO:0003674
GO:GO:0003779	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005856	GO:GO:0008150	GO:GO:0009987	GO:GO:0015629	GO:GO:0016043	GO:GO:0030042
InterPro:IPR002108	InterPro:IPR029006	PFAM:PF00241	PFscan:PS51263	PANTHER:PTHR11913	PANTHER:PTHR11913:SF26
SMART:SM00102	SUPFAM:SSF55753	EnsemblPlantsGene:TraesCS5A01G416100	EnsemblPlants:TraesCS5A01G416100.1	TIGR:cd11286	:

Description

No Description!

Coordinates

chr5A:-:605100692..605103483

Molecular Weight (calculated)

16748.9 Da

IEP (calculated)

5.304

GRAVY (calculated)

-0.417

Length

145 amino acids

Sequence
(BLAST)

001: MAFMRTSSNA SSGMGVAPDI RETFLELQMK KAFRYVIFKI EEKQKQVVVE KTGATTESYD DFLACLPEND CRYALYDFDF VTGENVQKSK IFFIAWSPDT
101: SRICAKMLYS TSKDRIKQEL DGFHYEIQAT DPTEVKLDVL RDRAH

Best Arabidopsis Sequence Match ( AT2G31200.1 )
(BLAST)

001: MSFRGLSRPN AISGMGVADE SKTTFLELQR KKTHRYVVFK IDESKKEVVV EKTGNPTESY DDFLASLPDN DCRYAVYDFD FVTSENCQKS KIFFFAWSPS
101: TSGIRAKVLY STSKDQLSRE LQGIHYEIQA TDPTEVDLEV LRERAN

Arabidopsis Description

ADF6Actin-depolymerizing factor 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZSK2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.