Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 2
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G31200.1 | CDY01102 | AT3G12110.1 | 21798944 |
| AT2G31200.1 | CDY08455 | AT3G12110.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra018268.1-P | Field mustard | mitochondrion | 99.32 | 99.32 |
| CDY24750 | Canola | cytosol | 97.26 | 97.26 |
| AT2G31200.1 | Thale cress | cytosol | 85.62 | 85.62 |
| VIT_07s0005g03310.t01 | Wine grape | cytosol | 80.14 | 81.82 |
| KRH67374 | Soybean | cytosol | 79.45 | 79.45 |
| KRG95660 | Soybean | cytosol | 77.4 | 77.4 |
| Os03t0780400-01 | Rice | plastid | 71.92 | 72.41 |
| Os12t0628100-01 | Rice | extracellular | 71.23 | 71.72 |
| EER90794 | Sorghum | cytosol | 71.23 | 71.72 |
| Zm00001d034326_P001 | Maize | cytosol | 64.38 | 71.21 |
| Zm00001d013141_P001 | Maize | cytosol | 70.55 | 71.03 |
| TraesCS5D01G423800.1 | Wheat | golgi | 70.55 | 71.03 |
| TraesCS5A01G416100.1 | Wheat | cytosol | 69.86 | 70.34 |
| Solyc09g072600.1.1 | Tomato | cytosol | 22.6 | 67.35 |
| CDY31586 | Canola | cytosol | 58.9 | 65.15 |
| CDX71067 | Canola | cytosol | 56.16 | 62.12 |
| CDY52365 | Canola | cytosol | 54.79 | 62.02 |
| CDX94438 | Canola | cytosol | 54.79 | 62.02 |
| CDX89411 | Canola | cytosol | 54.11 | 61.24 |
| PGSC0003DMT400026656 | Potato | mitochondrion | 75.34 | 60.77 |
| CDY31909 | Canola | cytosol | 54.11 | 60.77 |
| CDX90057 | Canola | cytosol | 54.79 | 60.15 |
| CDX75477 | Canola | cytosol | 48.63 | 58.68 |
| CDY02249 | Canola | cytosol | 26.03 | 58.46 |
| TraesCS1B01G197600.1 | Wheat | cytosol | 59.59 | 58.0 |
| CDY54088 | Canola | cytosol | 38.36 | 57.73 |
| CDY40654 | Canola | cytosol | 48.63 | 57.72 |
| TraesCS1D01G186600.1 | Wheat | cytosol | 59.59 | 57.62 |
| CDX89737 | Canola | cytosol | 56.16 | 57.34 |
| CDX88730 | Canola | cytosol | 60.27 | 57.14 |
| CDY02247 | Canola | cytosol | 55.48 | 56.64 |
| GSMUA_Achr1P09160_001 | Banana | cytosol | 75.34 | 56.41 |
| Os10t0521100-01 | Rice | cytosol | 58.22 | 56.29 |
| CDY09242 | Canola | cytosol | 58.22 | 55.56 |
| TraesCS1A01G183100.2 | Wheat | cytosol | 58.9 | 55.48 |
| CDY15154 | Canola | cytosol | 56.85 | 55.33 |
| CDY72027 | Canola | cytosol | 40.41 | 55.14 |
| HORVU1Hr1G048450.4 | Barley | cytosol | 59.59 | 55.06 |
| CDX71068 | Canola | cytosol | 60.96 | 54.27 |
| CDX69101 | Canola | cytosol | 52.05 | 53.52 |
| CDX72508 | Canola | cytosol | 50.0 | 53.28 |
| CDX99133 | Canola | cytosol, plastid | 60.27 | 52.69 |
| CDX86048 | Canola | cytosol, plastid | 59.59 | 52.1 |
| CDY32581 | Canola | cytosol | 19.18 | 51.85 |
| HORVU5Hr1G100770.1 | Barley | cytosol, plastid | 70.55 | 51.5 |
| CDY38025 | Canola | cytosol | 56.85 | 47.16 |
| CDX92721 | Canola | mitochondrion | 56.16 | 45.81 |
| KXG39048 | Sorghum | plastid | 58.22 | 44.97 |
| CDX88731 | Canola | cytosol, plastid | 58.9 | 43.22 |
| Zm00001d034024_P001 | Maize | cytosol, plastid | 42.47 | 40.26 |
| Zm00001d029656_P003 | Maize | cytosol | 56.16 | 39.05 |
| CDY50194 | Canola | cytosol | 56.16 | 38.5 |
| CDX80216 | Canola | cytosol | 61.64 | 35.71 |
| CDY07204 | Canola | cytosol | 56.16 | 30.26 |
| Os07t0297500-00 | Rice | cytosol | 41.78 | 26.29 |
| CDY51146 | Canola | cytosol, mitochondrion | 56.85 | 23.58 |
Protein Annotations
| MapMan:20.2.2.8 | Gene3D:3.40.20.10 | GO:A0A078FBQ5 | UniProt:A0A078FBQ5 | InterPro:ADF-H | InterPro:ADF-H/Gelsolin-like_dom_sf |
| InterPro:ADF/Cofilin | EnsemblPlants:CDY10786 | ProteinID:CDY10786 | ProteinID:CDY10786.1 | GO:GO:0003674 | GO:GO:0003779 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005856 |
| GO:GO:0008150 | GO:GO:0009987 | GO:GO:0015629 | GO:GO:0016043 | GO:GO:0030042 | EnsemblPlantsGene:GSBRNA2T00048624001 |
| InterPro:IPR002108 | InterPro:IPR029006 | PFAM:PF00241 | PFscan:PS51263 | PANTHER:PTHR11913 | PANTHER:PTHR11913:SF20 |
| SMART:SM00102 | SUPFAM:SSF55753 | UniParc:UPI0004EED37E | : | : | : |
Description
BnaA05g11500DBnaA05g11500D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FBQ5]
Coordinates
chrLK032006:-:724644..725830
Molecular Weight (calculated)
16982.0 Da
IEP (calculated)
8.196
GRAVY (calculated)
-0.712
Length
146 amino acids
Sequence
(BLAST)
(BLAST)
001: MSFRGLRKPN ATSGMGVADQ SKTTYHELQR KKTHRYVVFK IDELKNQVVV EKTGNPAESY DDFLASLPDN DCRYAVYDFD FVTAENCQKS KIFFVAWSPE
101: TSRIRAKMLY ATSKERFRRE LQGIHYEIQA TDPTEVDLDV LRERAN
101: TSRIRAKMLY ATSKERFRRE LQGIHYEIQA TDPTEVDLDV LRERAN
001: MSFRGLSRPN AISGMGVADE SKTTFLELQR KKTHRYVVFK IDESKKEVVV EKTGNPTESY DDFLASLPDN DCRYAVYDFD FVTSENCQKS KIFFFAWSPS
101: TSGIRAKVLY STSKDQLSRE LQGIHYEIQA TDPTEVDLEV LRERAN
101: TSGIRAKVLY STSKDQLSRE LQGIHYEIQA TDPTEVDLEV LRERAN
Arabidopsis Description
ADF6Actin-depolymerizing factor 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZSK2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.