Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G59880.1 | CDX73342 | AT1G35670.1 | 19130088 |
| AT5G59880.1 | CDY37101 | AT1G35670.1 | 19130088 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY31586 | Canola | cytosol | 82.47 | 96.21 |
| Bra006687.1-P | Field mustard | cytosol | 90.91 | 91.5 |
| KRH19714 | Soybean | nucleus | 79.87 | 88.49 |
| CDX71067 | Canola | cytosol | 75.32 | 87.88 |
| CDX71068 | Canola | cytosol | 91.56 | 85.98 |
| AT5G59880.1 | Thale cress | cytosol | 77.27 | 85.61 |
| GSMUA_Achr10P... | Banana | cytosol | 72.08 | 84.09 |
| Os05t0113400-01 | Rice | cytosol, extracellular, plastid | 75.32 | 84.06 |
| KRH11708 | Soybean | mitochondrion | 75.32 | 83.45 |
| KRH36708 | Soybean | mitochondrion | 74.68 | 82.73 |
| KRH32309 | Soybean | cytosol, nucleus | 77.27 | 82.64 |
| EER95084 | Sorghum | cytosol | 72.73 | 80.58 |
| GSMUA_Achr6P15320_001 | Banana | cytosol | 68.83 | 80.3 |
| EES17589 | Sorghum | cytosol | 72.08 | 79.86 |
| CDX94438 | Canola | cytosol | 66.88 | 79.84 |
| CDY09242 | Canola | cytosol | 79.22 | 79.74 |
| PGSC0003DMT400008913 | Potato | cytosol | 70.78 | 79.56 |
| Solyc06g005360.2.1 | Tomato | cytosol, extracellular, nucleus | 70.78 | 79.56 |
| HORVU0Hr1G000200.1 | Barley | cytosol | 71.43 | 79.14 |
| CDY52365 | Canola | cytosol | 66.23 | 79.07 |
| CDX89411 | Canola | cytosol | 65.58 | 78.29 |
| Zm00001d035629_P001 | Maize | cytosol | 69.48 | 76.98 |
| CDY31909 | Canola | cytosol | 64.94 | 76.92 |
| CDY32581 | Canola | cytosol | 26.62 | 75.93 |
| Zm00001d035625_P001 | Maize | cytosol | 64.29 | 75.57 |
| CDX99133 | Canola | cytosol, plastid | 78.57 | 72.46 |
| CDX90057 | Canola | cytosol | 62.34 | 72.18 |
| CDX86048 | Canola | cytosol, plastid | 77.92 | 71.86 |
| GSMUA_Achr9P04050_001 | Banana | endoplasmic reticulum, extracellular | 75.97 | 70.48 |
| GSMUA_Achr6P33310_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 75.32 | 69.88 |
| CDY54088 | Canola | cytosol | 43.51 | 69.07 |
| CDY15154 | Canola | cytosol | 65.58 | 67.33 |
| CDY72027 | Canola | cytosol | 46.1 | 66.36 |
| VIT_08s0040g03360.t01 | Wine grape | plastid | 78.57 | 64.02 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, vacuole | 76.62 | 63.78 |
| CDX88731 | Canola | cytosol, plastid | 80.52 | 62.31 |
| VIT_11s0103g00260.t01 | Wine grape | cytosol | 46.75 | 61.02 |
| CDY24750 | Canola | cytosol | 57.79 | 60.96 |
| VIT_10s0092g00330.t01 | Wine grape | cytosol | 35.71 | 60.44 |
| CDY10786 | Canola | cytosol | 57.14 | 60.27 |
| CDX92721 | Canola | mitochondrion | 68.83 | 59.22 |
| CDY38025 | Canola | cytosol | 67.53 | 59.09 |
| CDX75477 | Canola | cytosol | 43.51 | 55.37 |
| CDY40654 | Canola | cytosol | 43.51 | 54.47 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum | 75.97 | 53.92 |
| CDX80216 | Canola | cytosol | 87.66 | 53.57 |
| CDX89737 | Canola | cytosol | 49.35 | 53.15 |
| CDY02247 | Canola | cytosol | 49.35 | 53.15 |
| CDX69101 | Canola | cytosol | 48.05 | 52.11 |
| CDX72508 | Canola | cytosol | 45.45 | 51.09 |
| CDY50194 | Canola | cytosol | 69.48 | 50.23 |
| CDY02249 | Canola | cytosol | 20.13 | 47.69 |
| GSMUA_Achr2P16220_001 | Banana | cytosol | 75.32 | 41.73 |
| CDY07204 | Canola | cytosol | 64.94 | 36.9 |
| CDY51146 | Canola | cytosol, mitochondrion | 64.94 | 28.41 |
Protein Annotations
| MapMan:20.2.2.8 | Gene3D:3.40.20.10 | GO:A0A078DHQ9 | InterPro:ADF-H | InterPro:ADF-H/Gelsolin-like_dom_sf | InterPro:ADF/Cofilin |
| EnsemblPlants:CDX88730 | ProteinID:CDX88730 | ProteinID:CDX88730.1 | GO:GO:0003674 | GO:GO:0003779 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005856 | GO:GO:0008150 |
| GO:GO:0009987 | GO:GO:0015629 | GO:GO:0016043 | GO:GO:0030042 | EnsemblPlantsGene:GSBRNA2T00148782001 | InterPro:IPR002108 |
| InterPro:IPR029006 | PFAM:PF00241 | PFscan:PS51263 | PANTHER:PTHR11913 | PANTHER:PTHR11913:SF27 | SMART:SM00102 |
| SUPFAM:SSF55753 | UniParc:UPI0004EE6D6F | : | : | : | : |
Description
BnaA03g09190D
Coordinates
chrLK031856:+:704774..706654
Molecular Weight (calculated)
17791.3 Da
IEP (calculated)
7.290
GRAVY (calculated)
-0.357
Length
154 amino acids
Sequence
(BLAST)
(BLAST)
001: MISLYIRVKF LENVCRANAA SGMAVHDDCK LKFLELKAKR TYRFIVYKIE EQQKQVVVEK LGEPGQSHDD FAASLPADEC RYAIFDFDFV TAENCQKSKI
101: FFIAWSPDTA RVRSKMIYAS SKDRFKRELD GIQVELQATD PTEMDLDIFK SRAN
101: FFIAWSPDTA RVRSKMIYAS SKDRFKRELD GIQVELQATD PTEMDLDIFK SRAN
001: MANAASGMAV HDDCKLKFME LKTKRTHRFI IYKIEELQKQ VIVEKIGEPG QTHEDLAASL PADECRYAIF DFDFVSSEGV PRSRIFFVAW SPDTARVRSK
101: MIYASSKDRF KRELDGIQVE LQATDPTEMD LDVFKSRAN
101: MIYASSKDRF KRELDGIQVE LQATDPTEMD LDVFKSRAN
Arabidopsis Description
ADF3Actin-depolymerizing factor 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZSK4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.