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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, mitochondrion, plastid, cytosol, plasma membrane, golgi

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • extracellular 3
  • endoplasmic reticulum 3
  • vacuole 3
  • plasma membrane 3
  • golgi 3
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, mitochondrion, plastid, secretory
Any Predictor:cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:nucleus
EpiLoc:cytosol
iPSORT:secretory
MultiLoc:mitochondrion
Plant-mPloc:cytosol
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
GSMUA_Achr10P...
GSMUA_Achr2P08110_001
GSMUA_Achr6P25560_001
GSMUA_Achr9P08680_001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G59880.1 GSMUA_Achr10P... AT1G35670.1 19130088
AT5G59880.1 GSMUA_Achr2P08110_001 AT1G35670.1 19130088
AT5G59880.1 GSMUA_Achr6P25560_001 AT1G35670.1 19130088
AT5G59880.1 GSMUA_Achr9P08680_001 AT1G35670.1 19130088
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr10P... Banana cytosol 71.08 89.39
GSMUA_Achr6P15320_001 Banana cytosol 68.67 86.36
VIT_13s0019g00550.t01 Wine grape cytosol 72.29 86.33
KRH19714 Soybean nucleus 72.29 86.33
Solyc10g084660.1.1 Tomato cytosol, extracellular 70.48 84.17
PGSC0003DMT400071339 Potato cytosol 72.29 83.92
Bra006686.1-P Field mustard cytosol 66.27 83.33
CDX71067 Canola cytosol 66.27 83.33
Solyc04g011370.2.1 Tomato extracellular 71.69 83.22
GSMUA_Achr9P04050_001 Banana endoplasmic reticulum, extracellular 83.13 83.13
PGSC0003DMT400028567 Potato cytosol 69.28 82.73
AT5G59890.1 Thale cress cytosol 69.28 82.73
Solyc09g010440.2.1 Tomato plastid 69.28 82.73
PGSC0003DMT400087280 Potato cytosol 67.47 82.35
PGSC0003DMT400023061 Potato cytosol 68.67 82.01
EER95084 Sorghum cytosol 68.67 82.01
Bra002522.1-P Field mustard cytosol 68.07 81.3
KRH11708 Soybean mitochondrion 68.07 81.3
CDY31586 Canola cytosol 64.46 81.06
KRH36708 Soybean mitochondrion 67.47 80.58
GSMUA_Achr8P11370_001 Banana cytosol 53.61 80.18
KRH32309 Soybean cytosol, nucleus 68.67 79.17
Solyc06g005360.2.1 Tomato cytosol, extracellular, nucleus 64.46 78.1
PGSC0003DMT400008913 Potato cytosol 64.46 78.1
Bra020277.1-P Field mustard cytosol 69.88 77.85
AT5G59880.1 Thale cress cytosol 65.06 77.7
Bra006687.1-P Field mustard cytosol 71.08 77.12
AT3G46010.2 Thale cress cytosol 69.28 76.67
GSMUA_AchrUn_... Banana cytosol 60.24 75.76
CDX88730 Canola cytosol 69.88 75.32
Bra020276.1-P Field mustard cytosol 69.28 75.16
GSMUA_Achr11P... Banana cytosol 59.64 75.0
CDY09242 Canola cytosol 68.67 74.51
GSMUA_Achr11P... Banana cytosol 59.04 74.24
VIT_06s0004g04280.t01 Wine grape cytosol 74.7 73.81
GSMUA_Achr4P29400_001 Banana cytosol 42.77 72.45
GSMUA_Achr1P00290_001 Banana cytosol 57.23 71.97
CDX71068 Canola cytosol 71.08 71.95
AT3G46000.2 Thale cress cytosol 66.27 70.51
GSMUA_Achr5P24750_001 Banana cytosol 46.99 70.27
GSMUA_Achr7P00900_001 Banana cytosol 55.42 69.7
Bra038266.1-P Field mustard cytosol 68.07 67.66
CDX99133 Canola cytosol, plastid 68.07 67.66
GSMUA_Achr10P... Banana endoplasmic reticulum, vacuole 75.3 67.57
CDX86048 Canola cytosol, plastid 67.47 67.07
VIT_08s0040g03360.t01 Wine grape plastid 74.7 65.61
GSMUA_Achr2P13120_001 Banana cytosol 57.23 65.52
VIT_11s0103g00260.t01 Wine grape cytosol 45.18 63.56
GSMUA_Achr2P17320_001 Banana cytosol 55.42 63.45
GSMUA_Achr7P16650_001 Banana cytosol 36.14 62.5
GSMUA_Achr6P15330_001 Banana cytosol, plastid 33.73 62.22
VIT_10s0092g00330.t01 Wine grape cytosol 33.73 61.54
CDX88731 Canola cytosol, plastid 71.08 59.3
AT3G45990.1 Thale cress cytosol 46.39 57.89
GSMUA_Achr10P... Banana endoplasmic reticulum 74.7 57.14
GSMUA_Achr11P... Banana cytosol, plastid 48.8 56.64
GSMUA_Achr5P18890_001 Banana cytosol, plastid 48.8 56.64
GSMUA_Achr5P12270_001 Banana plastid, vacuole 67.47 55.72
GSMUA_Achr1P09160_001 Banana cytosol 59.64 50.77
GSMUA_Achr11P... Banana cytosol 49.4 48.52
GSMUA_Achr2P16220_001 Banana cytosol 78.31 46.76
GSMUA_Achr2P18590_001 Banana cytosol 63.25 46.26
CDX80216 Canola cytosol 69.88 46.03
GSMUA_Achr2P11510_001 Banana cytosol 61.45 44.74
GSMUA_AchrUn_... Banana extracellular 19.28 36.78
Protein Annotations
MapMan:20.2.2.8Gene3D:3.40.20.10InterPro:ADF-HInterPro:ADF-H/Gelsolin-like_dom_sfInterPro:ADF/CofilinGO:GO:0003674
GO:GO:0003779GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005856GO:GO:0008150GO:GO:0009987GO:GO:0015629GO:GO:0016043GO:GO:0030042
EnsemblPlantsGene:GSMUA_Achr6G33310_001EnsemblPlants:GSMUA_Achr6P33310_001EnsemblPlants:GSMUA_Achr6T33310_001InterPro:IPR002108InterPro:IPR029006UniProt:M0TCC4
PFAM:PF00241PFscan:PS51263PANTHER:PTHR11913PANTHER:PTHR11913:SF50SMART:SM00102SUPFAM:SSF55753
UniParc:UPI000294DFE5SEG:seg::::
Description
Actin-depolymerizing factor 2 [Source:GMGC_GENE;Acc:GSMUA_Achr6G33310_001]
Coordinates
chr6:+:32424206..32430532
Molecular Weight (calculated)
18930.6 Da
IEP (calculated)
5.393
GRAVY (calculated)
-0.275
Length
166 amino acids
Sequence
(BLAST)
001: MQTFGVRSPL FSIFSTDLFA AIAAPLRMAN AASGMAVNDD CKLKFLELKA KRTYRFVIFK IDEKQKEVVV EKVGEPSSSY EDFAASLPTD ECRYAIYDFD
101: FVTEENLQKS KIFFIAWSPD SSRVRSKMLY ASSKDRFKRE LDGIQVELQA TDPTEMGLDV FRSRAN
Best Arabidopsis Sequence Match ( AT3G46010.1 )
(BLAST)
001: MANAASGMAV HDDCKLRFLE LKAKRTHRFI VYKIEEKQKQ VVVEKVGQPI QTYEEFAACL PADECRYAIY DFDFVTAENC QKSKIFFIAW CPDIAKVRSK
101: MIYASSKDRF KRELDGIQVE LQATDPTEMD LDVFRSRAN
Arabidopsis Description
ADF1Actin depolymerizing factor 1 [Source:UniProtKB/TrEMBL;Acc:A8MR09]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.