Factsheet for GSMUA_AchrUn_randomP06230_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P11370_001	Banana	cytosol	76.52	90.99
GSMUA_Achr1P00290_001	Banana	cytosol	88.64	88.64
VIT_16s0050g00220.t01	Wine grape	cytosol	87.88	87.88
GSMUA_Achr11P...	Banana	cytosol	87.88	87.88
GSMUA_Achr11P...	Banana	cytosol	85.61	85.61
GSMUA_Achr4P29400_001	Banana	cytosol	59.09	79.59
GSMUA_Achr6P15320_001	Banana	cytosol	78.79	78.79
GSMUA_Achr10P...	Banana	cytosol	75.0	75.0
Solyc01g094400.2.1	Tomato	unclear	71.97	69.34
PGSC0003DMT400000464	Potato	cytosol	71.97	69.34
PGSC0003DMT400026582	Potato	mitochondrion	71.21	67.63
Solyc10g017550.2.1	Tomato	unclear	70.45	66.91
GSMUA_Achr5P24750_001	Banana	cytosol	54.55	64.86
GSMUA_Achr7P00900_001	Banana	cytosol	63.64	63.64
GSMUA_Achr9P04050_001	Banana	endoplasmic reticulum, extracellular	77.27	61.45
GSMUA_Achr6P33310_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	75.76	60.24
GSMUA_Achr2P13120_001	Banana	cytosol	64.39	58.62
GSMUA_Achr5P12270_001	Banana	plastid, vacuole	87.88	57.71
GSMUA_Achr2P17320_001	Banana	cytosol	62.88	57.24
GSMUA_Achr10P...	Banana	endoplasmic reticulum, vacuole	78.79	56.22
GSMUA_Achr7P16650_001	Banana	cytosol	40.15	55.21
GSMUA_Achr6P15330_001	Banana	cytosol, plastid	36.36	53.33
GSMUA_Achr11P...	Banana	cytosol, plastid	56.82	52.45
GSMUA_Achr5P18890_001	Banana	cytosol, plastid	56.06	51.75
GSMUA_Achr2P18590_001	Banana	cytosol	87.12	50.66
GSMUA_Achr2P11510_001	Banana	cytosol	84.85	49.12
GSMUA_Achr10P...	Banana	endoplasmic reticulum	78.79	47.93
VIT_15s0046g03040.t01	Wine grape	cytosol	86.36	44.53
GSMUA_Achr11P...	Banana	cytosol	56.06	43.79
GSMUA_Achr1P09160_001	Banana	cytosol	62.12	42.05
GSMUA_Achr2P16220_001	Banana	cytosol	80.3	38.13
GSMUA_AchrUn_...	Banana	extracellular	24.24	36.78

Protein Annotations

MapMan:20.2.2.8	Gene3D:3.40.20.10	InterPro:ADF-H	InterPro:ADF-H/Gelsolin-like_dom_sf	InterPro:ADF/Cofilin	GO:GO:0003674
GO:GO:0003779	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005856	GO:GO:0008150	GO:GO:0009987	GO:GO:0015629	GO:GO:0016043	GO:GO:0030042
EnsemblPlantsGene:GSMUA_AchrUn_randomG06230_001	EnsemblPlants:GSMUA_AchrUn_randomP06230_001	EnsemblPlants:GSMUA_AchrUn_randomT06230_001	InterPro:IPR002108	InterPro:IPR029006	UniProt:M0U6T4
PFAM:PF00241	PFscan:PS51263	PANTHER:PTHR11913	PANTHER:PTHR11913:SF27	SMART:SM00102	SUPFAM:SSF55753
UniParc:UPI0002959860	:	:	:	:	:

Description

Actin-depolymerizing factor [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG06230_001]

Coordinates

chrchrUn_random:+:25965142..25966530

Molecular Weight (calculated)

15460.5 Da

IEP (calculated)

5.346

GRAVY (calculated)

-0.429

Length

132 amino acids

Sequence
(BLAST)

001: MAVNDECKLK FLELKAKRNF RFIVFKIDEK IQQVMVEKLG RPDESYDDFT ACFPPNECRY AVFDFDFVTD ENCQKSKIFF IAWSPDSSKV RSKMLYASSK
101: DRFKRELDGI QVELQATDPS EMSIDIVKAR AM

Best Arabidopsis Sequence Match ( AT4G25590.1 )
(BLAST)

001: MANAASGMAV EDECKLKFLE LKSKRNYRFI IFRIDGQQVV VEKLGNPDET YDDFTASLPA NECRYAVFDF DFITDENCQK SKIFFIAWSP DSSRVRMKMV
101: YASSKDRFKR ELDGIQVELQ ATDPSEMSFD IIKSRAL

Arabidopsis Description

ADF7Actin-depolymerizing factor 7 [Source:UniProtKB/Swiss-Prot;Acc:Q67ZM4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.