Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr5P24750_001 | Banana | cytosol | 72.92 | 63.06 |
| GSMUA_Achr2P17320_001 | Banana | cytosol | 93.75 | 62.07 |
| GSMUA_Achr2P13120_001 | Banana | cytosol | 88.54 | 58.62 |
| GSMUA_Achr7P00900_001 | Banana | cytosol | 76.04 | 55.3 |
| Os03t0780400-01 | Rice | plastid | 82.29 | 54.48 |
| EER90794 | Sorghum | cytosol | 81.25 | 53.79 |
| Zm00001d013141_P001 | Maize | cytosol | 81.25 | 53.79 |
| TraesCS5D01G423800.1 | Wheat | golgi | 79.17 | 52.41 |
| TraesCS5A01G416100.1 | Wheat | cytosol | 79.17 | 52.41 |
| Zm00001d034326_P001 | Maize | cytosol | 66.67 | 48.48 |
| GSMUA_Achr10P... | Banana | cytosol | 59.38 | 43.18 |
| GSMUA_Achr6P15320_001 | Banana | cytosol | 58.33 | 42.42 |
| GSMUA_AchrUn_... | Banana | cytosol | 55.21 | 40.15 |
| GSMUA_Achr11P... | Banana | cytosol | 54.17 | 39.39 |
| GSMUA_Achr1P00290_001 | Banana | cytosol | 53.12 | 38.64 |
| HORVU5Hr1G100770.1 | Barley | cytosol, plastid | 79.17 | 38.0 |
| GSMUA_Achr1P09160_001 | Banana | cytosol | 76.04 | 37.44 |
| GSMUA_Achr11P... | Banana | cytosol | 51.04 | 37.12 |
| GSMUA_Achr8P11370_001 | Banana | cytosol | 42.71 | 36.94 |
| GSMUA_Achr6P33310_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 62.5 | 36.14 |
| GSMUA_Achr4P29400_001 | Banana | cytosol | 35.42 | 34.69 |
| GSMUA_Achr9P04050_001 | Banana | endoplasmic reticulum, extracellular | 59.38 | 34.34 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, vacuole | 65.62 | 34.05 |
| GSMUA_Achr5P18890_001 | Banana | cytosol, plastid | 50.0 | 33.57 |
| GSMUA_Achr11P... | Banana | cytosol, plastid | 47.92 | 32.17 |
| GSMUA_Achr11P... | Banana | cytosol | 51.04 | 28.99 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum | 64.58 | 28.57 |
| GSMUA_Achr5P12270_001 | Banana | plastid, vacuole | 59.38 | 28.36 |
| GSMUA_Achr2P18590_001 | Banana | cytosol | 58.33 | 24.67 |
| GSMUA_Achr2P11510_001 | Banana | cytosol | 57.29 | 24.12 |
| Zm00001d034024_P001 | Maize | cytosol, plastid | 38.54 | 24.03 |
| GSMUA_Achr2P16220_001 | Banana | cytosol | 65.62 | 22.66 |
| GSMUA_Achr6P15330_001 | Banana | cytosol, plastid | 10.42 | 11.11 |
| GSMUA_AchrUn_... | Banana | extracellular | 3.12 | 3.45 |
Protein Annotations
| MapMan:20.2.2.8 | Gene3D:3.40.20.10 | InterPro:ADF-H | InterPro:ADF-H/Gelsolin-like_dom_sf | InterPro:ADF/Cofilin | GO:GO:0003674 |
| GO:GO:0003779 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005856 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0015629 | GO:GO:0016043 | GO:GO:0030042 |
| EnsemblPlantsGene:GSMUA_Achr7G16650_001 | EnsemblPlants:GSMUA_Achr7P16650_001 | EnsemblPlants:GSMUA_Achr7T16650_001 | InterPro:IPR002108 | InterPro:IPR029006 | UniProt:M0TI52 |
| PFAM:PF00241 | PFscan:PS51263 | PANTHER:PTHR11913 | PANTHER:PTHR11913:SF20 | SMART:SM00102 | SUPFAM:SSF55753 |
| UniParc:UPI00029661D7 | : | : | : | : | : |
Description
Actin-depolymerizing factor 2 [Source:GMGC_GENE;Acc:GSMUA_Achr7G16650_001]
Coordinates
chr7:+:16238653..16241610
Molecular Weight (calculated)
11276.2 Da
IEP (calculated)
4.884
GRAVY (calculated)
-0.518
Length
96 amino acids
Sequence
(BLAST)
(BLAST)
1: MAFLRSYSNA SSGMGVAEDC RDTFVELQRK KTHRYVIFKI DEKRKQVIVE KTGDATESYD DFMASLPEND CRYAVYDFDF VTEENCQKSK IFFIAW
001: MSFRGLSRPN AISGMGVADE SKTTFLELQR KKTHRYVVFK IDESKKEVVV EKTGNPTESY DDFLASLPDN DCRYAVYDFD FVTSENCQKS KIFFFAWSPS
101: TSGIRAKVLY STSKDQLSRE LQGIHYEIQA TDPTEVDLEV LRERAN
101: TSGIRAKVLY STSKDQLSRE LQGIHYEIQA TDPTEVDLEV LRERAN
Arabidopsis Description
ADF6Actin-depolymerizing factor 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZSK2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.