Factsheet for Zm00001d034024_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, plastid, secretory
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d013141_P001	Maize	cytosol	55.84	59.31
Zm00001d034326_P001	Maize	cytosol	50.0	58.33
TraesCS5D01G423800.1	Wheat	golgi	53.9	57.24
EER90794	Sorghum	cytosol	53.9	57.24
TraesCS5A01G416100.1	Wheat	cytosol	53.25	56.55
Os03t0780400-01	Rice	plastid	53.25	56.55
Solyc09g072600.1.1	Tomato	cytosol	15.58	48.98
GSMUA_Achr2P17320_001	Banana	cytosol	44.81	47.59
GSMUA_Achr7P00900_001	Banana	cytosol	38.96	45.45
VIT_05s0049g00980.t01	Wine grape	cytosol	42.21	45.45
Solyc09g072590.2.1	Tomato	cytosol	42.21	44.83
VIT_07s0005g03310.t01	Wine grape	cytosol	41.56	44.76
GSMUA_Achr2P13120_001	Banana	cytosol	40.26	42.76
Solyc09g090110.2.1	Tomato	cytosol	40.26	42.76
PGSC0003DMT400044218	Potato	cytosol	40.26	42.76
KRG92420	Soybean	cytosol	40.91	42.57
KRH34385	Soybean	cytosol	40.91	42.57
Bra018268.1-P	Field mustard	mitochondrion	40.26	42.47
AT2G31200.1	Thale cress	cytosol	40.26	42.47
CDY10786	Canola	cytosol	40.26	42.47
KRH51874	Soybean	cytosol	31.82	41.88
KRH67374	Soybean	cytosol	39.61	41.78
KRG95660	Soybean	cytosol	39.61	41.78
HORVU5Hr1G100770.1	Barley	cytosol, plastid	53.9	41.5
CDY24750	Canola	cytosol	38.96	41.1
Zm00001d051388_P001	Maize	cytosol	35.06	38.85
GSMUA_Achr7P16650_001	Banana	cytosol	24.03	38.54
Zm00001d017516_P001	Maize	cytosol	33.77	37.41
PGSC0003DMT400026656	Potato	mitochondrion	42.21	35.91
Zm00001d028392_P001	Maize	cytosol	33.12	35.66
Zm00001d035629_P001	Maize	cytosol	30.52	33.81
Zm00001d012966_P001	Maize	plastid	29.22	32.37
Zm00001d034644_P001	Maize	plastid	29.22	32.37
Zm00001d035625_P001	Maize	cytosol	27.27	32.06
Zm00001d047942_P001	Maize	mitochondrion	33.77	30.23
Zm00001d034643_P001	Maize	cytosol	24.03	24.83
Zm00001d029656_P003	Maize	cytosol	29.22	21.43
Zm00001d002714_P003	Maize	cytosol	15.58	13.95

Protein Annotations

MapMan:20.2.2.8	Gene3D:3.40.20.10	UniProt:A0A1D6L4K5	InterPro:ADF-H	InterPro:ADF-H/Gelsolin-like_dom_sf	InterPro:ADF/Cofilin
GO:GO:0003674	GO:GO:0003779	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005856	GO:GO:0008150	GO:GO:0009987	GO:GO:0015629	GO:GO:0016020
GO:GO:0016021	GO:GO:0016043	GO:GO:0030042	InterPro:IPR002108	InterPro:IPR029006	ProteinID:ONM09307.1
PFAM:PF00241	PFscan:PS51263	PANTHER:PTHR11913	PANTHER:PTHR11913:SF26	SMART:SM00102	SUPFAM:SSF55753
TMHMM:TMhelix	UniParc:UPI00084578EC	EnsemblPlantsGene:Zm00001d034024	EnsemblPlants:Zm00001d034024_P001	EnsemblPlants:Zm00001d034024_T001	:

Description

Actin-depolymerizing factor 6

Coordinates

chr1:+:281451347..281454024

Molecular Weight (calculated)

17662.5 Da

IEP (calculated)

9.742

GRAVY (calculated)

-0.222

Length

154 amino acids

Sequence
(BLAST)

001: MAMVSNASSG MGVAPNIRET FVELQMKKAF RYVIFKIEEK QKQILRLYMY PCGASYSFML NAYALAFPLV SVHQTFYLIY RYPRSPLTSR IRAKMLYSTS
101: KDRIKYELDG FHYEIQATDP SEVARWTLRF CGSGLTEAGS PLKKGPMEGH EPFG

Best Arabidopsis Sequence Match ( AT2G31200.1 )
(BLAST)

001: MSFRGLSRPN AISGMGVADE SKTTFLELQR KKTHRYVVFK IDESKKEVVV EKTGNPTESY DDFLASLPDN DCRYAVYDFD FVTSENCQKS KIFFFAWSPS
101: TSGIRAKVLY STSKDQLSRE LQGIHYEIQA TDPTEVDLEV LRERAN

Arabidopsis Description

ADF6Actin-depolymerizing factor 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZSK2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.