Factsheet for Zm00001d017516_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d051388_P001	Maize	cytosol	96.4	96.4
EES05762	Sorghum	cytosol	94.96	94.96
TraesCS6D01G229200.1	Wheat	cytosol	90.65	90.65
TraesCS6A01G247000.1	Wheat	cytosol	88.49	88.49
VIT_16s0050g00220.t01	Wine grape	cytosol	80.58	84.85
TraesCS6B01G277600.1	Wheat	cytosol	88.49	84.83
GSMUA_Achr11P...	Banana	cytosol	79.14	83.33
GSMUA_Achr11P...	Banana	cytosol	76.98	81.06
PGSC0003DMT400000464	Potato	cytosol	69.06	70.07
Solyc01g094400.2.1	Tomato	unclear	69.06	70.07
PGSC0003DMT400026582	Potato	mitochondrion	68.35	68.35
Solyc10g017550.2.1	Tomato	unclear	67.63	67.63
Zm00001d035625_P001	Maize	cytosol	62.59	66.41
Zm00001d035629_P001	Maize	cytosol	66.19	66.19
Zm00001d034644_P001	Maize	plastid	56.83	56.83
Zm00001d012966_P001	Maize	plastid	55.4	55.4
Zm00001d028392_P001	Maize	cytosol	55.4	53.85
Zm00001d013141_P001	Maize	cytosol	54.68	52.41
Zm00001d034326_P001	Maize	cytosol	49.64	52.27
GSMUA_Achr2P11510_001	Banana	cytosol	82.73	50.44
GSMUA_Achr2P18590_001	Banana	cytosol	79.86	48.9
Zm00001d034643_P001	Maize	cytosol	48.92	45.64
Zm00001d047942_P001	Maize	mitochondrion	54.68	44.19
VIT_15s0046g03040.t01	Wine grape	cytosol	81.3	44.14
Zm00001d034024_P001	Maize	cytosol, plastid	37.41	33.77
Zm00001d002714_P003	Maize	cytosol	41.01	33.14
Zm00001d029656_P003	Maize	cytosol	48.2	31.9

Protein Annotations

EntrezGene:100282060	MapMan:20.2.2.8	Gene3D:3.40.20.10	InterPro:ADF-H	InterPro:ADF-H/Gelsolin-like_dom_sf	InterPro:ADF/Cofilin
ProteinID:AQK73332.1	UniProt:B6T304	EMBL:EU959369	GO:GO:0003674	GO:GO:0003779	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005856	GO:GO:0008150
GO:GO:0009987	GO:GO:0015629	GO:GO:0016043	GO:GO:0030042	InterPro:IPR002108	InterPro:IPR029006
PFAM:PF00241	PFscan:PS51263	PANTHER:PTHR11913	PANTHER:PTHR11913:SF31	SMART:SM00102	SUPFAM:SSF55753
UniParc:UPI000182CCFE	EnsemblPlantsGene:Zm00001d017516	EnsemblPlants:Zm00001d017516_P001	EnsemblPlants:Zm00001d017516_T001	:	:

Description

Actin-depolymerizing factor

Coordinates

chr5:-:198490145..198492974

Molecular Weight (calculated)

15894.0 Da

IEP (calculated)

7.804

GRAVY (calculated)

-0.271

Length

139 amino acids

Sequence
(BLAST)

001: MSNSASGMAV CDECKLKFLE LKAKRSFRFI VFKINENVQQ VVVDRLGGPG ESYDAFRACF PANECRYAVF DFDFVTDENC QKSKIFFISW APDASRVRSK
101: MLYASSKDRF KRELDGIQVE LQATEPSEMS MDIIKSRAL

Best Arabidopsis Sequence Match ( AT4G25590.1 )
(BLAST)

001: MANAASGMAV EDECKLKFLE LKSKRNYRFI IFRIDGQQVV VEKLGNPDET YDDFTASLPA NECRYAVFDF DFITDENCQK SKIFFIAWSP DSSRVRMKMV
101: YASSKDRFKR ELDGIQVELQ ATDPSEMSFD IIKSRAL

Arabidopsis Description

ADF7Actin-depolymerizing factor 7 [Source:UniProtKB/Swiss-Prot;Acc:Q67ZM4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.