Factsheet for Zm00001d013141_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER90794	Sorghum	cytosol	97.24	97.24
Zm00001d034326_P001	Maize	cytosol	86.9	95.45
Os03t0780400-01	Rice	plastid	95.17	95.17
TraesCS5D01G423800.1	Wheat	golgi	91.72	91.72
TraesCS5A01G416100.1	Wheat	cytosol	91.03	91.03
GSMUA_Achr7P16650_001	Banana	cytosol	53.79	81.25
GSMUA_Achr2P17320_001	Banana	cytosol	80.69	80.69
GSMUA_Achr7P00900_001	Banana	cytosol	69.66	76.52
VIT_05s0049g00980.t01	Wine grape	cytosol	75.17	76.22
KRH51874	Soybean	cytosol	61.38	76.07
GSMUA_Achr2P13120_001	Banana	cytosol	75.17	75.17
AT2G31200.1	Thale cress	cytosol	74.48	73.97
VIT_07s0005g03310.t01	Wine grape	cytosol	72.41	73.43
KRH67374	Soybean	cytosol	73.1	72.6
Solyc09g072590.2.1	Tomato	cytosol	72.41	72.41
KRH34385	Soybean	cytosol	73.79	72.3
KRG95660	Soybean	cytosol	72.41	71.92
KRG92420	Soybean	cytosol	73.1	71.62
CDY10786	Canola	cytosol	71.03	70.55
Bra018268.1-P	Field mustard	mitochondrion	71.03	70.55
CDY24750	Canola	cytosol	69.66	69.18
PGSC0003DMT400044218	Potato	cytosol	68.97	68.97
Solyc09g090110.2.1	Tomato	cytosol	68.97	68.97
HORVU5Hr1G100770.1	Barley	cytosol, plastid	91.72	66.5
Solyc09g072600.1.1	Tomato	cytosol	20.0	59.18
PGSC0003DMT400026656	Potato	mitochondrion	71.72	57.46
Zm00001d051388_P001	Maize	cytosol	53.79	56.12
Zm00001d034024_P001	Maize	cytosol, plastid	59.31	55.84
Zm00001d017516_P001	Maize	cytosol	52.41	54.68
Zm00001d035629_P001	Maize	cytosol	52.41	54.68
Zm00001d035625_P001	Maize	cytosol	48.97	54.2
Zm00001d028392_P001	Maize	cytosol	51.03	51.75
Zm00001d034644_P001	Maize	plastid	47.59	49.64
Zm00001d012966_P001	Maize	plastid	46.9	48.92
Zm00001d047942_P001	Maize	mitochondrion	48.97	41.28
Zm00001d034643_P001	Maize	cytosol	39.31	38.26
Zm00001d029656_P003	Maize	cytosol	52.41	36.19
Zm00001d002714_P003	Maize	cytosol	24.14	20.35

Protein Annotations

EntrezGene:100281968	MapMan:20.2.2.8	Gene3D:3.40.20.10	InterPro:ADF-H	InterPro:ADF-H/Gelsolin-like_dom_sf	InterPro:ADF/Cofilin
ProteinID:AQK62558.1	UniProt:B4FTP0	EMBL:BT040478	EMBL:EU952711	EMBL:EU958937	GO:GO:0003674
GO:GO:0003779	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005856	GO:GO:0008150	GO:GO:0009987	GO:GO:0015629	GO:GO:0016043	GO:GO:0030042
InterPro:IPR002108	InterPro:IPR029006	PFAM:PF00241	PFscan:PS51263	PANTHER:PTHR11913	PANTHER:PTHR11913:SF26
SMART:SM00102	SUPFAM:SSF55753	UniParc:UPI00017B79D2	EnsemblPlantsGene:Zm00001d013141	EnsemblPlants:Zm00001d013141_P001	EnsemblPlants:Zm00001d013141_T001

Description

Actin-depolymerizing factor 6

Coordinates

chr5:+:5373242..5376614

Molecular Weight (calculated)

16834.0 Da

IEP (calculated)

6.541

GRAVY (calculated)

-0.471

Length

145 amino acids

Sequence
(BLAST)

001: MAFMRSRSNA SSGMGVAPNI RETFVELQMK KAFRYVIFKI EEKQKQVVVE KTGATTESYD DFLASLPEND CRYALYDFDF VTGENVQKSK IFFIAWSPST
101: SRIRAKMLYS TSKDRIKYEL DGFHYEIQAT DPSEVDIEVL RERAH

Best Arabidopsis Sequence Match ( AT2G31200.1 )
(BLAST)

001: MSFRGLSRPN AISGMGVADE SKTTFLELQR KKTHRYVVFK IDESKKEVVV EKTGNPTESY DDFLASLPDN DCRYAVYDFD FVTSENCQKS KIFFFAWSPS
101: TSGIRAKVLY STSKDQLSRE LQGIHYEIQA TDPTEVDLEV LRERAN

Arabidopsis Description

ADF6Actin-depolymerizing factor 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZSK2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.