Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 4
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH51874 | Soybean | cytosol | 77.62 | 94.87 |
| KRH34385 | Soybean | cytosol | 92.31 | 89.19 |
| VIT_07s0005g03310.t01 | Wine grape | cytosol | 88.11 | 88.11 |
| KRG92420 | Soybean | cytosol | 90.91 | 87.84 |
| PGSC0003DMT400044218 | Potato | cytosol | 88.11 | 86.9 |
| Solyc09g090110.2.1 | Tomato | cytosol | 88.11 | 86.9 |
| Os12t0628100-01 | Rice | extracellular | 79.72 | 78.62 |
| Os03t0780400-01 | Rice | plastid | 78.32 | 77.24 |
| EER90794 | Sorghum | cytosol | 76.92 | 75.86 |
| Zm00001d013141_P001 | Maize | cytosol | 76.22 | 75.17 |
| Zm00001d034326_P001 | Maize | cytosol | 68.53 | 74.24 |
| TraesCS5D01G423800.1 | Wheat | golgi | 74.83 | 73.79 |
| TraesCS5A01G416100.1 | Wheat | cytosol | 74.13 | 73.1 |
| VIT_03s0038g02220.t01 | Wine grape | cytosol | 60.14 | 65.15 |
| GSMUA_Achr1P09160_001 | Banana | cytosol | 88.11 | 64.62 |
| VIT_16s0050g00220.t01 | Wine grape | cytosol | 59.44 | 64.39 |
| VIT_13s0019g00550.t01 | Wine grape | cytosol | 61.54 | 63.31 |
| TraesCS1B01G197600.1 | Wheat | cytosol | 65.03 | 62.0 |
| TraesCS1D01G186600.1 | Wheat | cytosol | 65.03 | 61.59 |
| Os10t0521100-01 | Rice | cytosol | 65.03 | 61.59 |
| TraesCS1A01G183100.2 | Wheat | cytosol | 64.34 | 59.35 |
| HORVU1Hr1G048450.4 | Barley | cytosol | 65.03 | 58.86 |
| VIT_06s0004g04280.t01 | Wine grape | cytosol | 65.03 | 55.36 |
| VIT_10s0092g00330.t01 | Wine grape | cytosol | 34.27 | 53.85 |
| HORVU5Hr1G100770.1 | Barley | cytosol, plastid | 74.83 | 53.5 |
| VIT_11s0103g00260.t01 | Wine grape | cytosol | 41.96 | 50.85 |
| VIT_08s0040g03360.t01 | Wine grape | plastid | 64.34 | 48.68 |
| KXG39048 | Sorghum | plastid | 64.34 | 48.68 |
| Zm00001d029656_P003 | Maize | cytosol | 62.24 | 42.38 |
| Zm00001d034024_P001 | Maize | cytosol, plastid | 45.45 | 42.21 |
| VIT_15s0046g03040.t01 | Wine grape | cytosol | 59.44 | 33.2 |
| Os07t0297500-00 | Rice | cytosol | 44.06 | 27.16 |
Protein Annotations
| EntrezGene:100242532 | wikigene:100242532 | MapMan:20.2.2.8 | Gene3D:3.40.20.10 | InterPro:ADF-H | InterPro:ADF-H/Gelsolin-like_dom_sf |
| InterPro:ADF/Cofilin | ProteinID:CBI23641 | ProteinID:CBI23641.3 | UniProt:D7SZG4 | EMBL:FN595496 | GO:GO:0003674 |
| GO:GO:0003779 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005856 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0015629 | GO:GO:0016043 | GO:GO:0030042 |
| InterPro:IPR002108 | InterPro:IPR029006 | EntrezGene:LOC100242532 | wikigene:LOC100242532 | PFAM:PF00241 | PFscan:PS51263 |
| PANTHER:PTHR11913 | PANTHER:PTHR11913:SF20 | SMART:SM00102 | SUPFAM:SSF55753 | TIGR:TC54075 | UniParc:UPI00019834C8 |
| ArrayExpress:VIT_05s0049g00980 | EnsemblPlantsGene:VIT_05s0049g00980 | EnsemblPlants:VIT_05s0049g00980.t01 | RefSeq:XP_002285175 | RefSeq:XP_002285175.1 | SEG:seg |
Description
No Description!
Coordinates
chr5:-:7989750..7993579
Molecular Weight (calculated)
16551.6 Da
IEP (calculated)
7.434
GRAVY (calculated)
-0.605
Length
143 amino acids
Sequence
(BLAST)
(BLAST)
001: MSFRGSNASS GMGVADHCKA TYLELQRKKV HRYVIFKIDE KKKEVVVEKT GGPAESYDDF TASLPENDCR YAIYDFDFVT SENCQKSKIF FIAWSPSVSR
101: IRAKMLYATS KDRFRRELEG IHYEIQATDP TEMDLEVLRE RAN
101: IRAKMLYATS KDRFRRELEG IHYEIQATDP TEMDLEVLRE RAN
001: MSFRGLSRPN AISGMGVADE SKTTFLELQR KKTHRYVVFK IDESKKEVVV EKTGNPTESY DDFLASLPDN DCRYAVYDFD FVTSENCQKS KIFFFAWSPS
101: TSGIRAKVLY STSKDQLSRE LQGIHYEIQA TDPTEVDLEV LRERAN
101: TSGIRAKVLY STSKDQLSRE LQGIHYEIQA TDPTEVDLEV LRERAN
Arabidopsis Description
ADF6Actin-depolymerizing factor 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZSK2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.