Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS1D01G186600.1 | Wheat | cytosol | 99.33 | 98.68 |
HORVU1Hr1G048450.4 | Barley | cytosol | 99.33 | 94.3 |
TraesCS1A01G183100.2 | Wheat | cytosol | 94.0 | 90.97 |
Os10t0521100-01 | Rice | cytosol | 91.33 | 90.73 |
KXG39048 | Sorghum | plastid | 93.33 | 74.07 |
KRH51874 | Soybean | cytosol | 55.33 | 70.94 |
VIT_07s0005g03310.t01 | Wine grape | cytosol | 62.67 | 65.73 |
VIT_05s0049g00980.t01 | Wine grape | cytosol | 62.0 | 65.03 |
Zm00001d029656_P003 | Maize | cytosol | 90.0 | 64.29 |
KRH67374 | Soybean | cytosol | 62.0 | 63.7 |
KRH34385 | Soybean | cytosol | 62.67 | 63.51 |
KRG92420 | Soybean | cytosol | 62.0 | 62.84 |
Solyc09g072590.2.1 | Tomato | cytosol | 60.67 | 62.76 |
KRG95660 | Soybean | cytosol | 60.67 | 62.33 |
PGSC0003DMT400044218 | Potato | cytosol | 59.33 | 61.38 |
Solyc09g090110.2.1 | Tomato | cytosol | 59.33 | 61.38 |
AT2G31200.1 | Thale cress | cytosol | 58.67 | 60.27 |
CDY10786 | Canola | cytosol | 58.0 | 59.59 |
Bra018268.1-P | Field mustard | mitochondrion | 58.0 | 59.59 |
CDY24750 | Canola | cytosol | 57.33 | 58.9 |
Solyc09g072600.1.1 | Tomato | cytosol | 17.33 | 53.06 |
TraesCS2B01G429500.1 | Wheat | cytosol | 48.67 | 52.52 |
TraesCS2B01G255200.1 | Wheat | cytosol | 48.0 | 51.8 |
TraesCS4B01G227300.1 | Wheat | cytosol | 49.33 | 51.75 |
PGSC0003DMT400026656 | Potato | mitochondrion | 61.33 | 50.83 |
TraesCS6B01G277600.1 | Wheat | cytosol | 47.33 | 48.97 |
TraesCS5B01G491500.1 | Wheat | cytosol | 42.67 | 45.07 |
TraesCS5B01G491800.1 | Wheat | cytosol | 42.67 | 43.54 |
Os07t0297500-00 | Rice | cytosol | 57.33 | 37.07 |
Protein Annotations
MapMan:20.2.2.8 | Gene3D:3.40.20.10 | InterPro:ADF-H | InterPro:ADF-H/Gelsolin-like_dom_sf | InterPro:ADF/Cofilin | GO:GO:0003674 |
GO:GO:0003779 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
GO:GO:0005856 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0015629 | GO:GO:0016043 | GO:GO:0030042 |
InterPro:IPR002108 | InterPro:IPR029006 | PFAM:PF00241 | PFscan:PS51263 | PANTHER:PTHR11913 | PANTHER:PTHR11913:SF25 |
SMART:SM00102 | SUPFAM:SSF55753 | EnsemblPlantsGene:TraesCS1B01G197600 | EnsemblPlants:TraesCS1B01G197600.1 | TIGR:cd11286 | : |
Description
No Description!
Coordinates
chr1B:+:355155324..355156782
Molecular Weight (calculated)
17369.4 Da
IEP (calculated)
4.759
GRAVY (calculated)
-0.502
Length
150 amino acids
Sequence
(BLAST)
(BLAST)
001: MEFLGFTLMG GNSPAWIDVP ERSKSAFMEL KRRKVHRYVI FKIDDSTEEV VVEKTGAPGE SYDDFTASLP VDDCRYAVYD LDFVSDDNCR KSKIFFISWS
101: PDDSRIRAKT IYAVSRNQFR HELDGVHFEI QATDPDDMDL EVLRVRANRT
101: PDDSRIRAKT IYAVSRNQFR HELDGVHFEI QATDPDDMDL EVLRVRANRT
001: MSFRGLSRPN AISGMGVADE SKTTFLELQR KKTHRYVVFK IDESKKEVVV EKTGNPTESY DDFLASLPDN DCRYAVYDFD FVTSENCQKS KIFFFAWSPS
101: TSGIRAKVLY STSKDQLSRE LQGIHYEIQA TDPTEVDLEV LRERAN
101: TSGIRAKVLY STSKDQLSRE LQGIHYEIQA TDPTEVDLEV LRERAN
Arabidopsis Description
ADF6Actin-depolymerizing factor 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZSK2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.