Factsheet for Solyc09g072590.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc09g072600.1.1	Tomato	cytosol	33.79	100.0
VIT_07s0005g03310.t01	Wine grape	cytosol	84.14	85.31
KRH67374	Soybean	cytosol	82.07	81.51
KRG95660	Soybean	cytosol	81.38	80.82
Solyc09g090110.2.1	Tomato	cytosol	79.31	79.31
PGSC0003DMT400026656	Potato	mitochondrion	95.17	76.24
Os03t0780400-01	Rice	plastid	74.48	74.48
Os12t0628100-01	Rice	extracellular	74.48	74.48
EER90794	Sorghum	cytosol	73.1	73.1
TraesCS5D01G423800.1	Wheat	golgi	73.1	73.1
Zm00001d034326_P001	Maize	cytosol	66.21	72.73
Zm00001d013141_P001	Maize	cytosol	72.41	72.41
TraesCS5A01G416100.1	Wheat	cytosol	72.41	72.41
Solyc09g010440.2.1	Tomato	plastid	62.07	64.75
Solyc10g084660.1.1	Tomato	cytosol, extracellular	60.69	63.31
Solyc06g035980.2.1	Tomato	cytosol	58.62	62.04
TraesCS1B01G197600.1	Wheat	cytosol	62.76	60.67
Solyc03g025750.2.1	Tomato	cytosol	57.24	60.58
TraesCS1D01G186600.1	Wheat	cytosol	62.76	60.26
Solyc04g011370.2.1	Tomato	extracellular	59.31	60.14
Os10t0521100-01	Rice	cytosol	61.38	58.94
GSMUA_Achr1P09160_001	Banana	cytosol	78.62	58.46
Solyc06g005360.2.1	Tomato	cytosol, extracellular, nucleus	55.17	58.39
Solyc01g094400.2.1	Tomato	unclear	55.17	58.39
HORVU1Hr1G048450.4	Barley	cytosol	63.45	58.23
TraesCS1A01G183100.2	Wheat	cytosol	62.07	58.06
Solyc10g017550.2.1	Tomato	unclear	55.17	57.55
Solyc01g111380.2.1	Tomato	cytosol, plastid	56.55	57.34
HORVU5Hr1G100770.1	Barley	cytosol, plastid	73.1	53.0
KXG39048	Sorghum	plastid	61.38	47.09
Zm00001d034024_P001	Maize	cytosol, plastid	44.83	42.21
Zm00001d029656_P003	Maize	cytosol	59.31	40.95
Os07t0297500-00	Rice	cytosol	44.14	27.59

Protein Annotations

MapMan:20.2.2.8	Gene3D:3.40.20.10	InterPro:ADF-H	InterPro:ADF-H/Gelsolin-like_dom_sf	InterPro:ADF/Cofilin	GO:GO:0003674
GO:GO:0003779	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005856	GO:GO:0008150	GO:GO:0009987	GO:GO:0015629	GO:GO:0016043	GO:GO:0030042
InterPro:IPR002108	InterPro:IPR029006	UniProt:K4CUT5	PFAM:PF00241	PFscan:PS51263	PANTHER:PTHR11913
PANTHER:PTHR11913:SF21	SMART:SM00102	SUPFAM:SSF55753	EnsemblPlantsGene:Solyc09g072590.2	EnsemblPlants:Solyc09g072590.2.1	UniParc:UPI000276AF75
SEG:seg	:	:	:	:	:

Description

Actin-depolymerizing factor 6 [Source:Projected from Arabidopsis thaliana (AT2G31200) UniProtKB/Swiss-Prot;Acc:Q9ZSK2]

Coordinates

chr9:+:65115534..65117614

Molecular Weight (calculated)

16695.7 Da

IEP (calculated)

8.222

GRAVY (calculated)

-0.594

Length

145 amino acids

Sequence
(BLAST)

001: MSFKFRGPNA SSGMGVADHG KNAFLELKRK KVHRYVIFKI DEKKKEVVVE KTGSPAETFD DFTASLPEND CRYAVYDFDF VTSENCQKSK IFFVHWSPAT
101: SRIRAKMLYA TSKDAFKREL DGFHYEIQAT DPTEVDLEVL KDRAH

Best Arabidopsis Sequence Match ( AT2G31200.1 )
(BLAST)

001: MSFRGLSRPN AISGMGVADE SKTTFLELQR KKTHRYVVFK IDESKKEVVV EKTGNPTESY DDFLASLPDN DCRYAVYDFD FVTSENCQKS KIFFFAWSPS
101: TSGIRAKVLY STSKDQLSRE LQGIHYEIQA TDPTEVDLEV LRERAN

Arabidopsis Description

ADF6Actin-depolymerizing factor 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZSK2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.