Factsheet for Solyc03g025750.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400037205	Potato	cytosol	95.62	95.62
AT5G52360.1	Thale cress	cytosol	87.59	87.59
Bra029119.1-P	Field mustard	cytosol	82.48	86.92
Bra028304.1-P	Field mustard	cytosol	81.75	86.15
CDY31909	Canola	cytosol	81.02	85.38
CDY52365	Canola	cytosol	80.29	85.27
CDX94438	Canola	cytosol	80.29	85.27
Solyc06g035980.2.1	Tomato	cytosol	84.67	84.67
CDX89411	Canola	cytosol	79.56	84.5
AT4G25590.1	Thale cress	cytosol	83.94	83.94
Bra019151.1-P	Field mustard	cytosol	78.83	83.72
Bra010456.1-P	Field mustard	cytosol	83.94	82.73
CDY32581	Canola	cytosol	32.12	81.48
GSMUA_Achr4P29400_001	Banana	cytosol	54.01	75.51
Bra013901.1-P	Field mustard	cytosol	83.21	75.0
Solyc01g094400.2.1	Tomato	unclear	74.45	74.45
CDY54088	Canola	cytosol	51.09	72.16
Solyc10g084660.1.1	Tomato	cytosol, extracellular	71.53	70.5
Solyc09g010440.2.1	Tomato	plastid	70.8	69.78
Solyc06g005360.2.1	Tomato	cytosol, extracellular, nucleus	69.34	69.34
Solyc04g011370.2.1	Tomato	extracellular	72.26	69.23
CDY72027	Canola	cytosol	54.01	69.16
Solyc10g017550.2.1	Tomato	unclear	70.07	69.06
CDX92721	Canola	mitochondrion	82.48	63.13
Solyc09g072590.2.1	Tomato	cytosol	60.58	57.24
Solyc09g090110.2.1	Tomato	cytosol	57.66	54.48
CDY50194	Canola	cytosol	82.48	53.05
Solyc01g111380.2.1	Tomato	cytosol, plastid	54.01	51.75
Solyc09g072600.1.1	Tomato	cytosol	16.79	46.94

Protein Annotations

MapMan:20.2.2.8	Gene3D:3.40.20.10	InterPro:ADF-H	InterPro:ADF-H/Gelsolin-like_dom_sf	InterPro:ADF/Cofilin	GO:GO:0003674
GO:GO:0003779	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005856	GO:GO:0008150	GO:GO:0009987	GO:GO:0015629	GO:GO:0016043	GO:GO:0030042
InterPro:IPR002108	InterPro:IPR029006	UniProt:K4BF48	PFAM:PF00241	PFscan:PS51263	PANTHER:PTHR11913
PANTHER:PTHR11913:SF33	SMART:SM00102	SUPFAM:SSF55753	EnsemblPlantsGene:Solyc03g025750.2	EnsemblPlants:Solyc03g025750.2.1	UniParc:UPI0002768E8E

Description

No Description!

Coordinates

chr3:+:3149274..3150565

Molecular Weight (calculated)

15802.7 Da

IEP (calculated)

4.837

GRAVY (calculated)

-0.442

Length

137 amino acids

Sequence
(BLAST)

001: MANAVSGTAV QDECKLKFLE LKAKRNYRFI IFKIDGQEVV VEKLGSPEES YDNFTNSLPP DECRYAVFDF DFTTNENIQK SKIFFIAWSP ESSTVRMKMV
101: YASSKDRFKR ELDGIQVELQ ATEPSEMSLD LIKSRAY

Best Arabidopsis Sequence Match ( AT5G52360.1 )
(BLAST)

001: MANAASGMAV EDECKLKFLE LKAKRNYRFI IFRIDGQQVV VEKLGSPQEN YDDFTNYLPP NECRYAVYDF DFTTAENIQK SKIFFIAWSP DSSRVRMKMV
101: YASSKDRFKR ELDGIQVELQ ATDPSEMSLD IIKSRAL

Arabidopsis Description

ADF12ADF10 [Source:UniProtKB/TrEMBL;Acc:A0A178UBW2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.