Factsheet for Solyc01g111380.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400015865	Potato	cytosol	98.6	98.6
KRH51402	Soybean	cytosol	87.41	87.41
KRH24296	Soybean	cytosol, plastid	87.41	87.41
KRH29274	Soybean	cytosol	80.42	87.12
VIT_03s0038g02220.t01	Wine grape	cytosol	78.32	84.85
Bra013058.1-P	Field mustard	cytosol	82.52	82.52
AT2G16700.1	Thale cress	cytosol	81.82	81.82
CDX89737	Canola	cytosol	81.82	81.82
CDY02247	Canola	cytosol	81.82	81.82
Os03t0243100-01	Rice	cytosol	77.62	77.62
Zm00001d028392_P001	Maize	cytosol	76.92	76.92
GSMUA_Achr5P18890_001	Banana	cytosol, plastid	76.92	76.92
AT4G34970.1	Thale cress	cytosol	75.52	76.6
HORVU4Hr1G063830.6	Barley	cytosol	75.52	75.52
CDX75477	Canola	cytosol	62.94	74.38
GSMUA_Achr11P...	Banana	cytosol, plastid	73.43	73.43
TraesCS4D01G228100.1	Wheat	cytosol	73.43	73.43
Bra017683.1-P	Field mustard	cytosol	69.23	73.33
CDY40654	Canola	cytosol	62.94	73.17
TraesCS4B01G227300.1	Wheat	cytosol	72.73	72.73
TraesCS4A01G071400.1	Wheat	cytosol	72.73	72.73
CDX69101	Canola	cytosol	70.63	71.13
Bra011575.1-P	Field mustard	cytosol	70.63	71.13
CDX72508	Canola	cytosol	67.83	70.8
GSMUA_Achr11P...	Banana	cytosol	76.22	64.5
Zm00001d047942_P001	Maize	mitochondrion	74.83	62.21
Solyc09g010440.2.1	Tomato	plastid	58.04	59.71
Solyc10g084660.1.1	Tomato	cytosol, extracellular	57.34	58.99
Solyc01g094400.2.1	Tomato	unclear	55.94	58.39
Solyc06g035980.2.1	Tomato	cytosol	55.24	57.66
Solyc09g090110.2.1	Tomato	cytosol	58.04	57.24
Solyc09g072590.2.1	Tomato	cytosol	57.34	56.55
Solyc04g011370.2.1	Tomato	extracellular	55.94	55.94
Solyc06g005360.2.1	Tomato	cytosol, extracellular, nucleus	52.45	54.74
Solyc03g025750.2.1	Tomato	cytosol	51.75	54.01
OQU92928	Sorghum	cytosol, plastid	76.22	53.43
Solyc10g017550.2.1	Tomato	unclear	51.05	52.52
Solyc09g072600.1.1	Tomato	cytosol	13.99	40.82

Protein Annotations

MapMan:20.2.2.8	Gene3D:3.40.20.10	InterPro:ADF-H	InterPro:ADF-H/Gelsolin-like_dom_sf	InterPro:ADF/Cofilin	GO:GO:0003674
GO:GO:0003779	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005856	GO:GO:0008150	GO:GO:0009987	GO:GO:0015629	GO:GO:0016043	GO:GO:0030042
InterPro:IPR002108	InterPro:IPR029006	UniProt:K4B400	PFAM:PF00241	PFscan:PS51263	PANTHER:PTHR11913
PANTHER:PTHR11913:SF16	SMART:SM00102	SUPFAM:SSF55753	EnsemblPlantsGene:Solyc01g111380.2	EnsemblPlants:Solyc01g111380.2.1	UniParc:UPI0002767554

Description

No Description!

Coordinates

chr1:+:97649521..97650606

Molecular Weight (calculated)

16446.8 Da

IEP (calculated)

8.771

GRAVY (calculated)

-0.397

Length

143 amino acids

Sequence
(BLAST)

001: MAMAFKMATT GMWVTDECKN SYMDMKWKKN HRYIVYKIDE KSRLVTVDKV GGPAENYEDL AAALPKDDCR YAVFDFDFVT VDNCRKSKIF FIAWSPTESR
101: IRAKILYATS KAGLRRVLDG VSYELQATDP TEMGMDVIKD RAK

Best Arabidopsis Sequence Match ( AT2G16700.1 )
(BLAST)

001: MAMAFKMATT GMRVTDECTS SFMDMKWKKV HRYIVFKIEE KSRKVTVDKV GGAGESYHDL EDSLPVDDCR YAVFDFDFVT VDNCRKSKIF FIAWSPEASK
101: IRAKILYATS KDGLRRVLEG IHYELQATDP TEMGFDIIQD RAK

Arabidopsis Description

ADF5ATADF5 [Source:UniProtKB/TrEMBL;Acc:A0A178VPY9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.