CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 5
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH24296	Soybean	cytosol, plastid	90.21	90.21
KRH29274	Soybean	cytosol	83.22	90.15
PGSC0003DMT400015865	Potato	cytosol	87.41	87.41
Solyc01g111380.2.1	Tomato	cytosol, plastid	87.41	87.41
VIT_03s0038g02220.t01	Wine grape	cytosol	80.42	87.12
AT2G16700.1	Thale cress	cytosol	83.92	83.92
CDX89737	Canola	cytosol	83.22	83.22
Bra013058.1-P	Field mustard	cytosol	82.52	82.52
CDY02247	Canola	cytosol	81.82	81.82
Os03t0243100-01	Rice	cytosol	76.22	76.22
Zm00001d028392_P001	Maize	cytosol	76.22	76.22
GSMUA_Achr5P18890_001	Banana	cytosol, plastid	76.22	76.22
AT4G34970.1	Thale cress	cytosol	74.13	75.18
HORVU4Hr1G063830.6	Barley	cytosol	74.83	74.83
CDX75477	Canola	cytosol	62.94	74.38
GSMUA_Achr11P...	Banana	cytosol, plastid	74.13	74.13
Bra017683.1-P	Field mustard	cytosol	69.93	74.07
CDY40654	Canola	cytosol	62.94	73.17
TraesCS4B01G227300.1	Wheat	cytosol	72.73	72.73
TraesCS4A01G071400.1	Wheat	cytosol	72.73	72.73
CDX72508	Canola	cytosol	69.23	72.26
TraesCS4D01G228100.1	Wheat	cytosol	72.03	72.03
CDX69101	Canola	cytosol	71.33	71.83
Bra011575.1-P	Field mustard	cytosol	71.33	71.83
KRH51874	Soybean	cytosol	55.94	68.38
GSMUA_Achr11P...	Banana	cytosol	74.83	63.31
KRH67374	Soybean	cytosol	63.64	62.33
Zm00001d047942_P001	Maize	mitochondrion	74.13	61.63
KRH19714	Soybean	nucleus	59.44	61.15
KRG95660	Soybean	cytosol	61.54	60.27
KRH35309	Soybean	cytosol	57.34	59.85
KRG91521	Soybean	cytosol	57.34	59.85
KRH32309	Soybean	cytosol, nucleus	60.14	59.72
KRH36708	Soybean	mitochondrion	57.34	58.99
KRH11708	Soybean	mitochondrion	57.34	58.99
KRG92420	Soybean	cytosol	60.14	58.11
KRH34385	Soybean	cytosol	58.74	56.76
KRH77527	Soybean	cytosol	53.85	56.2
KRH27939	Soybean	cytosol	53.85	56.2
KRH41156	Soybean	cytosol	50.35	55.38
OQU92928	Sorghum	cytosol, plastid	76.92	53.92
KRH59855	Soybean	endoplasmic reticulum, extracellular	53.15	44.97

Protein Annotations

EntrezGene:100785493	MapMan:20.2.2.8	Gene3D:3.40.20.10	EMBL:ACUP02003373	InterPro:ADF-H	InterPro:ADF-H/Gelsolin-like_dom_sf
InterPro:ADF/Cofilin	EnsemblPlantsGene:GLYMA_06G003900	GO:GO:0003674	GO:GO:0003779	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005856	GO:GO:0008150	GO:GO:0009987
GO:GO:0015629	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0030042	UniProt:I1K6Z5
InterPro:IPR002108	InterPro:IPR029006	EnsemblPlants:KRH51402	ProteinID:KRH51402	ProteinID:KRH51402.1	PFAM:PF00241
PFscan:PS51263	PANTHER:PTHR11913	PANTHER:PTHR11913:SF16	SMART:SM00102	SUPFAM:SSF55753	UniParc:UPI000233AA4E

Description

hypothetical protein

Coordinates

chr6:-:363328..364582

Molecular Weight (calculated)

16323.6 Da

IEP (calculated)

5.948

GRAVY (calculated)

-0.276

Length

143 amino acids

Sequence
(BLAST)

001: MAMAFKMATT GMWVTDECKN SFMDMKWKKE HRYIVFKIDE GSRLVTVDKL GGPTEGYDDL TASLPTDDCR YAVFDFDFVT VDNCRKSKIF FIAWSPTASR
101: IRAKILYATS KDGLRRALDG ISYELQATDP TEMGFDVIRD IAK

Best Arabidopsis Sequence Match ( AT2G16700.1 )
(BLAST)

001: MAMAFKMATT GMRVTDECTS SFMDMKWKKV HRYIVFKIEE KSRKVTVDKV GGAGESYHDL EDSLPVDDCR YAVFDFDFVT VDNCRKSKIF FIAWSPEASK
101: IRAKILYATS KDGLRRVLEG IHYELQATDP TEMGFDIIQD RAK

Arabidopsis Description

ADF5ATADF5 [Source:UniProtKB/TrEMBL;Acc:A0A178VPY9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.