Factsheet for Bra013058.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 5
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY02247	Canola	cytosol	99.3	99.3
CDX89737	Canola	cytosol	99.3	99.3
AT2G16700.1	Thale cress	cytosol	91.61	91.61
KRH24296	Soybean	cytosol, plastid	85.31	85.31
KRH29274	Soybean	cytosol	78.32	84.85
PGSC0003DMT400015865	Potato	cytosol	83.22	83.22
Solyc01g111380.2.1	Tomato	cytosol, plastid	82.52	82.52
KRH51402	Soybean	cytosol	82.52	82.52
Bra017683.1-P	Field mustard	cytosol	77.62	82.22
VIT_03s0038g02220.t01	Wine grape	cytosol	75.52	81.82
GSMUA_Achr5P18890_001	Banana	cytosol, plastid	79.72	79.72
Bra011575.1-P	Field mustard	cytosol	79.02	79.58
Zm00001d028392_P001	Maize	cytosol	76.22	76.22
GSMUA_Achr11P...	Banana	cytosol, plastid	76.22	76.22
Os03t0243100-01	Rice	cytosol	75.52	75.52
HORVU4Hr1G063830.6	Barley	cytosol	74.83	74.83
TraesCS4B01G227300.1	Wheat	cytosol	74.13	74.13
TraesCS4A01G071400.1	Wheat	cytosol	74.13	74.13
TraesCS4D01G228100.1	Wheat	cytosol	74.13	74.13
GSMUA_Achr11P...	Banana	cytosol	77.62	65.68
Zm00001d047942_P001	Maize	mitochondrion	74.13	61.63
Bra028304.1-P	Field mustard	cytosol	52.45	57.69
Bra029119.1-P	Field mustard	cytosol	51.75	56.92
Bra010456.1-P	Field mustard	cytosol	55.24	56.83
Bra018268.1-P	Field mustard	mitochondrion	57.34	56.16
Bra019151.1-P	Field mustard	cytosol	50.35	55.81
Bra033236.1-P	Field mustard	cytosol	53.85	55.0
Bra002522.1-P	Field mustard	cytosol	53.15	54.68
OQU92928	Sorghum	cytosol, plastid	76.92	53.92
Bra006686.1-P	Field mustard	cytosol	48.95	53.03
Bra013901.1-P	Field mustard	cytosol	54.55	51.32
Bra020277.1-P	Field mustard	cytosol	52.45	50.34
Bra006687.1-P	Field mustard	cytosol	53.85	50.33
Bra020276.1-P	Field mustard	cytosol	51.05	47.71
Bra038266.1-P	Field mustard	cytosol	50.35	43.11
Bra037352.1-P	Field mustard	cytosol	51.75	26.33

Protein Annotations

MapMan:20.2.2.8	Gene3D:3.40.20.10	InterPro:ADF-H	InterPro:ADF-H/Gelsolin-like_dom_sf	InterPro:ADF/Cofilin	EnsemblPlantsGene:Bra013058
EnsemblPlants:Bra013058.1	EnsemblPlants:Bra013058.1-P	GO:GO:0003674	GO:GO:0003779	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005856	GO:GO:0008150	GO:GO:0009987
GO:GO:0015629	GO:GO:0016043	GO:GO:0030042	GO:GO:0051017	InterPro:IPR002108	InterPro:IPR029006
UniProt:M4D998	PFAM:PF00241	PFscan:PS51263	PANTHER:PTHR11913	PANTHER:PTHR11913:SF49	SMART:SM00102
SUPFAM:SSF55753	UniParc:UPI0002540AF6	:	:	:	:

Description

AT2G16700 (E=4e-073) ADF5, ATADF5 | ADF5 (ACTIN DEPOLYMERIZING FACTOR 5); actin binding

Coordinates

chrA03:+:20730340..20732157

Molecular Weight (calculated)

16442.8 Da

IEP (calculated)

8.453

GRAVY (calculated)

-0.268

Length

143 amino acids

Sequence
(BLAST)

001: MAMAFKMATT GMRVTEECTS SFLEMKWKKV HRYIVFKIDE NSRKVTVDKV GGAGENYQDL AASLPVDDCR YAVFDFDFVT VDNCRKSKIF FIYWSPEASR
101: IRAKILYATS KAGLRRVLEG IHYELQATDP TEMGFDIIQD RAK

Best Arabidopsis Sequence Match ( AT2G16700.1 )
(BLAST)

001: MAMAFKMATT GMRVTDECTS SFMDMKWKKV HRYIVFKIEE KSRKVTVDKV GGAGESYHDL EDSLPVDDCR YAVFDFDFVT VDNCRKSKIF FIAWSPEASK
101: IRAKILYATS KDGLRRVLEG IHYELQATDP TEMGFDIIQD RAK

Arabidopsis Description

ADF5ATADF5 [Source:UniProtKB/TrEMBL;Acc:A0A178VPY9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.