Factsheet for Bra038266.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX99133	Canola	cytosol, plastid	98.2	98.2
CDX86048	Canola	cytosol, plastid	97.01	97.01
KRH19714	Soybean	nucleus	71.86	86.33
AT3G46000.2	Thale cress	cytosol	80.24	85.9
Bra002522.1-P	Field mustard	cytosol	71.26	85.61
Bra006686.1-P	Field mustard	cytosol	67.66	85.61
GSMUA_Achr10P...	Banana	cytosol	65.27	82.58
Bra020277.1-P	Field mustard	cytosol	73.05	81.88
KRH11708	Soybean	mitochondrion	67.66	81.3
KRH32309	Soybean	cytosol, nucleus	70.06	81.25
Os05t0113400-01	Rice	cytosol, extracellular, plastid	67.07	81.16
KRH36708	Soybean	mitochondrion	67.07	80.58
GSMUA_Achr6P15320_001	Banana	cytosol	63.47	80.3
PGSC0003DMT400008913	Potato	cytosol	65.87	80.29
Solyc06g005360.2.1	Tomato	cytosol, extracellular, nucleus	65.87	80.29
Bra006687.1-P	Field mustard	cytosol	73.05	79.74
HORVU0Hr1G000200.1	Barley	cytosol	65.87	79.14
Bra020276.1-P	Field mustard	cytosol	71.86	78.43
EER95084	Sorghum	cytosol	65.27	78.42
EES17589	Sorghum	cytosol	64.67	77.7
Zm00001d035629_P001	Maize	cytosol	62.28	74.82
Bra029119.1-P	Field mustard	cytosol	58.08	74.62
Zm00001d035625_P001	Maize	cytosol	58.08	74.05
Bra028304.1-P	Field mustard	cytosol	56.89	73.08
Bra010456.1-P	Field mustard	cytosol	60.48	72.66
Bra033236.1-P	Field mustard	cytosol	59.88	71.43
Bra019151.1-P	Field mustard	cytosol	55.09	71.32
GSMUA_Achr6P33310_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	67.66	68.07
GSMUA_Achr9P04050_001	Banana	endoplasmic reticulum, extracellular	67.66	68.07
AT3G45990.1	Thale cress	cytosol	53.29	66.92
Bra013901.1-P	Field mustard	cytosol	60.48	66.45
GSMUA_Achr10P...	Banana	endoplasmic reticulum, vacuole	70.06	63.24
VIT_08s0040g03360.t01	Wine grape	plastid	70.06	61.9
Bra018268.1-P	Field mustard	mitochondrion	52.1	59.59
VIT_11s0103g00260.t01	Wine grape	cytosol	41.92	59.32
VIT_10s0092g00330.t01	Wine grape	cytosol	30.54	56.04
GSMUA_Achr10P...	Banana	endoplasmic reticulum	71.26	54.84
Bra017683.1-P	Field mustard	cytosol	41.92	51.85
Bra011575.1-P	Field mustard	cytosol	43.71	51.41
Bra013058.1-P	Field mustard	cytosol	43.11	50.35
GSMUA_Achr2P16220_001	Banana	cytosol	69.46	41.73
Bra037352.1-P	Field mustard	cytosol	58.68	34.88

Protein Annotations

MapMan:20.2.2.8	Gene3D:3.40.20.10	InterPro:ADF-H	InterPro:ADF-H/Gelsolin-like_dom_sf	InterPro:ADF/Cofilin	EnsemblPlantsGene:Bra038266
EnsemblPlants:Bra038266.1	EnsemblPlants:Bra038266.1-P	GO:GO:0003674	GO:GO:0003779	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005856	GO:GO:0008150	GO:GO:0009987
GO:GO:0015629	GO:GO:0016043	GO:GO:0030042	InterPro:IPR002108	InterPro:IPR029006	UniProt:M4FB00
PFAM:PF00241	PFscan:PS51263	PANTHER:PTHR11913	PANTHER:PTHR11913:SF33	SMART:SM00102	SUPFAM:SSF55753
UniParc:UPI000253F560	:	:	:	:	:

Description

AT3G46000 (E=3e-072) ADF2 | ADF2 (ACTIN DEPOLYMERIZING FACTOR 2); actin binding

Coordinates

chrA06:+:11279815..11280924

Molecular Weight (calculated)

19173.6 Da

IEP (calculated)

4.806

GRAVY (calculated)

-0.396

Length

167 amino acids

Sequence
(BLAST)

001: MVSSRSSSFY CFKAVRYDID FACGIESESV LANAASGMAV HDDCKLKFLE LKAKRTFRTI VYKIEDKQVI VEKLGEPEQS YDDFAASLPE NECRYAIYDF
101: DFVTEENCQK SKIFFIAWSP DTAKVRDKMI YASSKDRFKR ELDGIQVELQ ATDPTEMGLD VFKSRTN

Best Arabidopsis Sequence Match ( AT3G46000.1 )
(BLAST)

001: MANAASGMAV HDDCKLKFME LKAKRTFRTI VYKIEDKQVI VEKLGEPEQS YDDFAASLPA DDCRYCIYDF DFVTAENCQK SKIFFIAWSP DTAKVRDKMI
101: YASSKDRFKR ELDGIQVELQ ATDPTEMGLD VFKSRTN

Arabidopsis Description

ADF2Actin depolymerizing factor 2 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LRV3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.