Factsheet for Bra020276.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY09242	Canola	cytosol	99.35	99.35
Bra006686.1-P	Field mustard	cytosol	84.31	97.73
AT5G59890.1	Thale cress	cytosol	87.58	96.4
Bra002522.1-P	Field mustard	cytosol	78.43	86.33
KRH19714	Soybean	nucleus	77.12	84.89
Bra020277.1-P	Field mustard	cytosol	81.05	83.22
KRH11708	Soybean	mitochondrion	75.16	82.73
GSMUA_Achr10P...	Banana	cytosol	71.24	82.58
Bra006687.1-P	Field mustard	cytosol	82.35	82.35
KRH36708	Soybean	mitochondrion	74.51	82.01
Os05t0113400-01	Rice	cytosol, extracellular, plastid	73.2	81.16
KRH32309	Soybean	cytosol, nucleus	75.16	79.86
EES17589	Sorghum	cytosol	72.55	79.86
Solyc06g005360.2.1	Tomato	cytosol, extracellular, nucleus	71.24	79.56
PGSC0003DMT400008913	Potato	cytosol	71.24	79.56
HORVU0Hr1G000200.1	Barley	cytosol	71.9	79.14
EER95084	Sorghum	cytosol	71.9	79.14
GSMUA_Achr6P15320_001	Banana	cytosol	67.32	78.03
Zm00001d035625_P001	Maize	cytosol	66.67	77.86
Zm00001d035629_P001	Maize	cytosol	69.93	76.98
Bra010456.1-P	Field mustard	cytosol	66.67	73.38
Bra029119.1-P	Field mustard	cytosol	61.44	72.31
Bra038266.1-P	Field mustard	cytosol	78.43	71.86
Bra028304.1-P	Field mustard	cytosol	60.78	71.54
Bra033236.1-P	Field mustard	cytosol	65.36	71.43
Bra019151.1-P	Field mustard	cytosol	60.13	71.32
GSMUA_Achr6P33310_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	75.16	69.28
GSMUA_Achr9P04050_001	Banana	endoplasmic reticulum, extracellular	75.16	69.28
Bra013901.1-P	Field mustard	cytosol	65.36	65.79
VIT_08s0040g03360.t01	Wine grape	plastid	78.43	63.49
GSMUA_Achr10P...	Banana	endoplasmic reticulum, vacuole	75.82	62.7
VIT_10s0092g00330.t01	Wine grape	cytosol	36.6	61.54
VIT_11s0103g00260.t01	Wine grape	cytosol	47.06	61.02
Bra018268.1-P	Field mustard	mitochondrion	56.86	59.59
Bra017683.1-P	Field mustard	cytosol	46.41	52.59
Bra011575.1-P	Field mustard	cytosol	48.37	52.11
GSMUA_Achr10P...	Banana	endoplasmic reticulum	73.86	52.07
Bra013058.1-P	Field mustard	cytosol	47.71	51.05
GSMUA_Achr2P16220_001	Banana	cytosol	73.86	40.65
Bra037352.1-P	Field mustard	cytosol	61.44	33.45

Protein Annotations

MapMan:20.2.2.8	Gene3D:3.40.20.10	InterPro:ADF-H	InterPro:ADF-H/Gelsolin-like_dom_sf	InterPro:ADF/Cofilin	EnsemblPlantsGene:Bra020276
EnsemblPlants:Bra020276.1	EnsemblPlants:Bra020276.1-P	GO:GO:0003674	GO:GO:0003779	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005856	GO:GO:0007015	GO:GO:0008150
GO:GO:0009987	GO:GO:0015629	GO:GO:0016043	GO:GO:0030042	InterPro:IPR002108	InterPro:IPR029006
UniProt:M4DUT3	PFAM:PF00241	PFscan:PS51263	PANTHER:PTHR11913	PANTHER:PTHR11913:SF50	SMART:SM00102
SUPFAM:SSF55753	UniParc:UPI00025435F2	SEG:seg	:	:	:

Description

AT5G59890 (E=3e-060) ADF4, ATADF4 | ADF4 (ACTIN DEPOLYMERIZING FACTOR 4); actin binding

Coordinates

chrA02:-:5991870..5992478

Molecular Weight (calculated)

17600.0 Da

IEP (calculated)

6.760

GRAVY (calculated)

-0.406

Length

153 amino acids

Sequence
(BLAST)

001: MCGYVYKHSF DGSGNANAAS GMAVHDDCKL RFLELKAKRT HRFIVYKIEE KQKQVVVEKV GEPIQTYEDF AASLPAEECR YAIYDFDFVT AENCQKSKIF
101: FIAWCPDVAK VRSKMIYASS KDRFKRELDG IQVELQATDP TEMDLDVFKS RVN

Best Arabidopsis Sequence Match ( AT5G59890.1 )
(BLAST)

001: MANAASGMAV HDDCKLRFLE LKAKRTHRFI VYKIEEKQKQ VIVEKVGEPI LTYEDFAASL PADECRYAIY DFDFVTAENC QKSKIFFIAW CPDVAKVRSK
101: MIYASSKDRF KRELDGIQVE LQATDPTEMD LDVLKSRVN

Arabidopsis Description

ADF4Actin-depolymerizing factor 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZSK3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.