Factsheet for Bra013901.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 5
mitochondrion 1
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX89411	Canola	cytosol	84.87	100.0
Bra019151.1-P	Field mustard	cytosol	80.92	95.35
Bra010456.1-P	Field mustard	cytosol	86.84	94.96
AT4G25590.1	Thale cress	cytosol	84.21	93.43
Bra029119.1-P	Field mustard	cytosol	78.29	91.54
Bra028304.1-P	Field mustard	cytosol	78.29	91.54
PGSC0003DMT400037205	Potato	cytosol	75.66	83.94
KRH35309	Soybean	cytosol	75.66	83.94
KRG91521	Soybean	cytosol	75.66	83.94
Solyc03g025750.2.1	Tomato	cytosol	75.0	83.21
GSMUA_Achr4P29400_001	Banana	cytosol	52.63	81.63
Bra002522.1-P	Field mustard	cytosol	69.08	75.54
Bra033236.1-P	Field mustard	cytosol	68.42	74.29
Bra020277.1-P	Field mustard	cytosol	69.08	70.47
Bra006686.1-P	Field mustard	cytosol	61.18	70.45
Bra006687.1-P	Field mustard	cytosol	70.39	69.93
Bra020276.1-P	Field mustard	cytosol	65.79	65.36
Bra038266.1-P	Field mustard	cytosol	66.45	60.48
Bra018268.1-P	Field mustard	mitochondrion	55.26	57.53
Bra013058.1-P	Field mustard	cytosol	51.32	54.55
Bra017683.1-P	Field mustard	cytosol	46.71	52.59
Bra011575.1-P	Field mustard	cytosol	47.37	50.7
Bra037352.1-P	Field mustard	cytosol	67.76	36.65

Protein Annotations

MapMan:20.2.2.8	Gene3D:3.40.20.10	InterPro:ADF-H	InterPro:ADF-H/Gelsolin-like_dom_sf	InterPro:ADF/Cofilin	EnsemblPlantsGene:Bra013901
EnsemblPlants:Bra013901.1	EnsemblPlants:Bra013901.1-P	GO:GO:0003674	GO:GO:0003779	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005856	GO:GO:0008150	GO:GO:0009987
GO:GO:0015629	GO:GO:0016043	GO:GO:0030042	InterPro:IPR002108	InterPro:IPR029006	UniProt:M4DBP1
PFAM:PF00241	PFscan:PS51263	PANTHER:PTHR11913	PANTHER:PTHR11913:SF33	SMART:SM00102	SUPFAM:SSF55753
SignalP:SignalP-noTM	UniParc:UPI0002546A04	SEG:seg	:	:	:

Description

AT4G25590 (E=2e-062) ADF7 | ADF7 (actin depolymerizing factor 7); actin binding

Coordinates

chrA01:-:8372241..8374978

Molecular Weight (calculated)

17662.3 Da

IEP (calculated)

8.021

GRAVY (calculated)

-0.206

Length

152 amino acids

Sequence
(BLAST)

001: MIIRIRKIWL WEAIAPVANA ASGMAVEDNC KLKFLELKKR IFRFIIFRID GQQVVVEKLG NPQETYDDFT ASLPADECRY AVFDFDFTTN ENCQKSKIFF
101: IAWSPDSSRV RMKMVYASSK DRFKRELDGI QVELQATDPS EMSFDIIKSR AL

Best Arabidopsis Sequence Match ( AT1G01750.1 )
(BLAST)

001: MANSASGMHV SDECKLKFLE LKAKRNYRFI VFKIDEKAQQ VMIDKLGNPE ETYEDFTRSI PEDECRYAVY DYDFTTPENC QKSKIFFIAW SPDTSRVRSK
101: MLYASSKDRF KRELDGIQVE LQATDPSEMS LDIIKGRVNL

Arabidopsis Description

ADF11actin depolymerizing factor 11 [Source:TAIR;Acc:AT1G01750]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.