Factsheet for Bra037352.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra033236.1-P	Field mustard	cytosol	41.64	83.57
AT4G00680.2	Thale cress	cytosol, extracellular	44.48	83.33
CDY51146	Canola	cytosol, mitochondrion	99.29	79.26
Bra029119.1-P	Field mustard	cytosol	35.59	76.92
Bra019151.1-P	Field mustard	cytosol	34.88	75.97
Bra028304.1-P	Field mustard	cytosol	34.88	75.38
Bra010456.1-P	Field mustard	cytosol	36.65	74.1
Bra013901.1-P	Field mustard	cytosol	36.65	67.76
Bra002522.1-P	Field mustard	cytosol	33.45	67.63
Bra006686.1-P	Field mustard	cytosol	31.32	66.67
Bra020277.1-P	Field mustard	cytosol	34.52	65.1
Bra006687.1-P	Field mustard	cytosol	35.23	64.71
Bra020276.1-P	Field mustard	cytosol	33.45	61.44
Bra038266.1-P	Field mustard	cytosol	34.88	58.68
Bra018268.1-P	Field mustard	mitochondrion	29.18	56.16
Bra017683.1-P	Field mustard	cytosol	24.91	51.85
Bra013058.1-P	Field mustard	cytosol	26.33	51.75
Bra011575.1-P	Field mustard	cytosol	24.56	48.59

Protein Annotations

MapMan:20.2.2.8	Gene3D:3.40.20.10	InterPro:ADF-H	InterPro:ADF-H/Gelsolin-like_dom_sf	InterPro:ADF/Cofilin	EnsemblPlantsGene:Bra037352
EnsemblPlants:Bra037352.1	EnsemblPlants:Bra037352.1-P	ncoils:Coil	GO:GO:0003674	GO:GO:0003779	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005856	GO:GO:0008150
GO:GO:0009987	GO:GO:0015629	GO:GO:0016043	GO:GO:0030042	InterPro:IPR002108	InterPro:IPR029006
UniProt:M4F8E0	PFAM:PF00241	PFAM:PF03763	PFscan:PS51263	PANTHER:PTHR11913	PANTHER:PTHR11913:SF30
InterPro:Remorin_C	SMART:SM00102	SUPFAM:SSF55753	UniParc:UPI0002541A4F	:	:

Description

AT4G00680 (E=7e-071) ADF8 | ADF8 (ACTIN DEPOLYMERIZING FACTOR 8); actin binding

Coordinates

chrA09:+:930782..933478

Molecular Weight (calculated)

32610.1 Da

IEP (calculated)

9.158

GRAVY (calculated)

-0.772

Length

281 amino acids

Sequence
(BLAST)

001: MANSASGMHV NDECKVKFME LKAKRTYRYI VFKIDEKAQE VQIEKLGNPQ ETYDDFTNSI PENECRYAIY DFDFTTEDNC QKSKIYFIAW SPDTSRVRSK
101: MLYASSKDRF KREMDGIQVE LQATDPSEMS LDIIKERALS SQRIRCLYDC DYLCLRIVRD AMLPQFLGKA QLSVIKAWKE EKITKVTSKT QKRLHEISGW
201: ENKKTRKIES QLASVQRKMD SEKMEEAEKL RSKKAAVHAK AQEKKAKVQT RRAQEILHAE EEAARLQATG QIPNKSSCGC F

Best Arabidopsis Sequence Match ( AT4G00680.1 )
(BLAST)

001: MANSASGMHV NDECKIKFLE LKAKRTYRFI VFKIDEKAQQ VQIEKLGNPE ETYDDFTSSI PDDECRYAVY DFDFTTEDNC QKSKIFFIAW SPDTSRVRSK
101: MLYASSKDRF KREMEGIQVE LQATDPSEMS LDIIKGRLNL

Arabidopsis Description

ADF8actin depolymerizing factor 8 [Source:TAIR;Acc:AT4G00680]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.