Factsheet for Bra010456.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY52365	Canola	cytosol	92.81	100.0
Bra019151.1-P	Field mustard	cytosol	88.49	95.35
AT4G25590.1	Thale cress	cytosol	91.37	92.7
Bra029119.1-P	Field mustard	cytosol	86.33	92.31
Bra028304.1-P	Field mustard	cytosol	86.33	92.31
Bra013901.1-P	Field mustard	cytosol	94.96	86.84
PGSC0003DMT400037205	Potato	cytosol	83.45	84.67
KRH35309	Soybean	cytosol	83.45	84.67
KRG91521	Soybean	cytosol	83.45	84.67
Solyc03g025750.2.1	Tomato	cytosol	82.73	83.94
GSMUA_Achr4P29400_001	Banana	cytosol	57.55	81.63
Bra002522.1-P	Field mustard	cytosol	75.54	75.54
Bra033236.1-P	Field mustard	cytosol	74.1	73.57
Bra006686.1-P	Field mustard	cytosol	68.35	71.97
Bra006687.1-P	Field mustard	cytosol	78.42	71.24
Bra020277.1-P	Field mustard	cytosol	76.26	71.14
Bra020276.1-P	Field mustard	cytosol	73.38	66.67
Bra038266.1-P	Field mustard	cytosol	72.66	60.48
Bra018268.1-P	Field mustard	mitochondrion	61.87	58.9
Bra013058.1-P	Field mustard	cytosol	56.83	55.24
Bra017683.1-P	Field mustard	cytosol	51.8	53.33
Bra011575.1-P	Field mustard	cytosol	52.52	51.41
Bra037352.1-P	Field mustard	cytosol	74.1	36.65

Protein Annotations

MapMan:20.2.2.8	Gene3D:3.40.20.10	InterPro:ADF-H	InterPro:ADF-H/Gelsolin-like_dom_sf	InterPro:ADF/Cofilin	EnsemblPlantsGene:Bra010456
EnsemblPlants:Bra010456.1	EnsemblPlants:Bra010456.1-P	GO:GO:0003674	GO:GO:0003779	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005856	GO:GO:0008150	GO:GO:0009987
GO:GO:0015629	GO:GO:0016043	GO:GO:0030042	InterPro:IPR002108	InterPro:IPR029006	UniProt:M4D1V6
PFAM:PF00241	PFscan:PS51263	PANTHER:PTHR11913	PANTHER:PTHR11913:SF33	SMART:SM00102	SUPFAM:SSF55753
UniParc:UPI0002545A36	:	:	:	:	:

Description

AT4G25590 (E=1e-067) ADF7 | ADF7 (actin depolymerizing factor 7); actin binding

Coordinates

chrA08:+:14608563..14609542

Molecular Weight (calculated)

16025.1 Da

IEP (calculated)

5.969

GRAVY (calculated)

-0.468

Length

139 amino acids

Sequence
(BLAST)

001: MNEKANAASG MAVEDNCKLK FLELKKRTHR FIIFRIDGQQ VVVEKLGSPQ ETYDDFTASL PADECRYAVF DFDFTTNENC QKSKIFFIAW SPDSSRVRMK
101: MVYASSKDRF KRELDGIQVE LQATDPSEMS FDIIKSRAL

Best Arabidopsis Sequence Match ( AT4G25590.1 )
(BLAST)

001: MANAASGMAV EDECKLKFLE LKSKRNYRFI IFRIDGQQVV VEKLGNPDET YDDFTASLPA NECRYAVFDF DFITDENCQK SKIFFIAWSP DSSRVRMKMV
101: YASSKDRFKR ELDGIQVELQ ATDPSEMSFD IIKSRAL

Arabidopsis Description

ADF7Actin-depolymerizing factor 7 [Source:UniProtKB/Swiss-Prot;Acc:Q67ZM4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.