Factsheet for Bra033236.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90057	Canola	cytosol	95.0	100.0
CDY15154	Canola	cytosol	99.29	92.67
AT1G01750.2	Thale cress	cytosol	90.71	87.59
Bra029119.1-P	Field mustard	cytosol	73.57	79.23
Bra028304.1-P	Field mustard	cytosol	72.14	77.69
Bra019151.1-P	Field mustard	cytosol	69.29	75.19
Bra010456.1-P	Field mustard	cytosol	73.57	74.1
Bra006686.1-P	Field mustard	cytosol	67.14	71.21
Bra002522.1-P	Field mustard	cytosol	70.0	70.5
Bra013901.1-P	Field mustard	cytosol	74.29	68.42
Bra020277.1-P	Field mustard	cytosol	70.71	66.44
Bra006687.1-P	Field mustard	cytosol	72.14	66.01
Bra020276.1-P	Field mustard	cytosol	71.43	65.36
Bra038266.1-P	Field mustard	cytosol	71.43	59.88
Bra018268.1-P	Field mustard	mitochondrion	59.29	56.85
Bra013058.1-P	Field mustard	cytosol	55.0	53.85
Bra017683.1-P	Field mustard	cytosol	51.43	53.33
Bra011575.1-P	Field mustard	cytosol	50.0	49.3
Bra037352.1-P	Field mustard	cytosol	83.57	41.64

Protein Annotations

MapMan:20.2.2.8	Gene3D:3.40.20.10	InterPro:ADF-H	InterPro:ADF-H/Gelsolin-like_dom_sf	InterPro:ADF/Cofilin	EnsemblPlantsGene:Bra033236
EnsemblPlants:Bra033236.1	EnsemblPlants:Bra033236.1-P	GO:GO:0003674	GO:GO:0003779	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005856	GO:GO:0008150	GO:GO:0009987
GO:GO:0015629	GO:GO:0016043	GO:GO:0030042	InterPro:IPR002108	InterPro:IPR029006	UniProt:M4EWQ1
PFAM:PF00241	PFscan:PS51263	PANTHER:PTHR11913	PANTHER:PTHR11913:SF30	SMART:SM00102	SUPFAM:SSF55753
UniParc:UPI0002545334	:	:	:	:	:

Description

AT1G01750 (E=7e-072) ADF11 | ADF11 (ACTIN DEPOLYMERIZING FACTOR 11); actin binding

Coordinates

chrA10:+:4744422..4745015

Molecular Weight (calculated)

16289.4 Da

IEP (calculated)

5.971

GRAVY (calculated)

-0.561

Length

140 amino acids

Sequence
(BLAST)

001: MANSASGMHV NDECKLKFLE LKAKRNYRFI VFKIDEKAQQ VTIDMVGNPE ETYDSFTKCM PENECRYAVY DFDFTTPENC QKSKIFFIAW SPDTSRVRSK
101: MLYASSKDRF KRELDGIQVE LQATDPTEMS LDIIKGRVNL

Best Arabidopsis Sequence Match ( AT1G01750.1 )
(BLAST)

001: MANSASGMHV SDECKLKFLE LKAKRNYRFI VFKIDEKAQQ VMIDKLGNPE ETYEDFTRSI PEDECRYAVY DYDFTTPENC QKSKIFFIAW SPDTSRVRSK
101: MLYASSKDRF KRELDGIQVE LQATDPSEMS LDIIKGRVNL

Arabidopsis Description

ADF11actin depolymerizing factor 11 [Source:TAIR;Acc:AT1G01750]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.