Subcellular Localization
min:
: max
Winner_takes_all: extracellular, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 4
- extracellular 3
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G01750.2 | Thale cress | cytosol | 85.33 | 88.28 |
| AT4G25590.1 | Thale cress | cytosol | 71.33 | 78.1 |
| AT5G52360.1 | Thale cress | cytosol | 71.33 | 78.1 |
| AT5G59890.1 | Thale cress | cytosol | 66.0 | 71.22 |
| AT5G59880.1 | Thale cress | cytosol | 59.33 | 64.03 |
| AT3G46010.2 | Thale cress | cytosol | 64.0 | 64.0 |
| AT3G46000.2 | Thale cress | cytosol | 64.67 | 62.18 |
| AT2G31200.1 | Thale cress | cytosol | 54.67 | 56.16 |
| AT2G16700.1 | Thale cress | cytosol | 51.33 | 53.85 |
| AT3G45990.1 | Thale cress | cytosol | 46.0 | 51.88 |
| AT4G34970.1 | Thale cress | cytosol | 46.0 | 48.94 |
| CDY07204 | Canola | cytosol | 83.33 | 46.13 |
| Bra037352.1-P | Field mustard | cytosol | 83.33 | 44.48 |
| CDY51146 | Canola | cytosol, mitochondrion | 83.33 | 35.51 |
Protein Annotations
| MapMan:20.2.2.8 | Gene3D:3.40.20.10 | EntrezGene:828037 | UniProt:A0A1P8B506 | InterPro:ADF-H | InterPro:ADF-H/Gelsolin-like_dom_sf |
| InterPro:ADF/Cofilin | Symbol:ADF8 | ProteinID:ANM66672.1 | ArrayExpress:AT4G00680 | EnsemblPlantsGene:AT4G00680 | RefSeq:AT4G00680 |
| TAIR:AT4G00680 | RefSeq:AT4G00680-TAIR-G | EnsemblPlants:AT4G00680.2 | GO:GO:0003674 | GO:GO:0003779 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005856 | GO:GO:0008150 |
| GO:GO:0009987 | GO:GO:0015629 | GO:GO:0016043 | GO:GO:0030042 | InterPro:IPR002108 | InterPro:IPR029006 |
| RefSeq:NP_001328554.1 | PFAM:PF00241 | PFscan:PS51263 | PANTHER:PTHR11913 | PANTHER:PTHR11913:SF30 | SMART:SM00102 |
| SUPFAM:SSF55753 | UniParc:UPI0008485916 | : | : | : | : |
Description
ADF8actin depolymerizing factor 8 [Source:TAIR;Acc:AT4G00680]
Coordinates
chr4:-:279596..281072
Molecular Weight (calculated)
17354.6 Da
IEP (calculated)
4.874
GRAVY (calculated)
-0.461
Length
150 amino acids
Sequence
(BLAST)
(BLAST)
001: MTTCVCVCVV QANSASGMHV NDECKIKFLE LKAKRTYRFI VFKIDEKAQQ VQIEKLGNPE ETYDDFTSSI PDDECRYAVY DFDFTTEDNC QKSKIFFIAW
101: SPDTSRVRSK MLYASSKDRF KREMEGIQVE LQATDPSEMS LDIIKGRLNL
101: SPDTSRVRSK MLYASSKDRF KREMEGIQVE LQATDPSEMS LDIIKGRLNL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.