Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr10P... | Banana | cytosol | 60.9 | 61.36 |
| AT5G59890.1 | Thale cress | cytosol | 63.91 | 61.15 |
| AT5G59880.1 | Thale cress | cytosol | 60.9 | 58.27 |
| GSMUA_Achr6P15320_001 | Banana | cytosol | 57.14 | 57.58 |
| KRH36708 | Soybean | mitochondrion | 60.15 | 57.55 |
| KRH19714 | Soybean | nucleus | 60.15 | 57.55 |
| KRH11708 | Soybean | mitochondrion | 60.15 | 57.55 |
| Os05t0113400-01 | Rice | cytosol, extracellular, plastid | 59.4 | 57.25 |
| Solyc06g005360.2.1 | Tomato | cytosol, extracellular, nucleus | 58.65 | 56.93 |
| PGSC0003DMT400008913 | Potato | cytosol | 58.65 | 56.93 |
| AT3G46010.2 | Thale cress | cytosol | 63.91 | 56.67 |
| AT3G46000.2 | Thale cress | cytosol | 66.17 | 56.41 |
| HORVU0Hr1G000200.1 | Barley | cytosol | 57.89 | 55.4 |
| KRH32309 | Soybean | cytosol, nucleus | 59.4 | 54.86 |
| EER95084 | Sorghum | cytosol | 57.14 | 54.68 |
| EES17589 | Sorghum | cytosol | 57.14 | 54.68 |
| CDX99133 | Canola | cytosol, plastid | 66.92 | 53.29 |
| Bra038266.1-P | Field mustard | cytosol | 66.92 | 53.29 |
| CDX86048 | Canola | cytosol, plastid | 66.17 | 52.69 |
| Zm00001d035629_P001 | Maize | cytosol | 54.14 | 51.8 |
| Zm00001d035625_P001 | Maize | cytosol | 50.38 | 51.15 |
| AT1G01750.2 | Thale cress | cytosol | 54.14 | 49.66 |
| AT5G52360.1 | Thale cress | cytosol | 51.13 | 49.63 |
| AT4G25590.1 | Thale cress | cytosol | 51.13 | 49.63 |
| GSMUA_Achr6P33310_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 57.89 | 46.39 |
| AT4G00680.2 | Thale cress | cytosol, extracellular | 51.88 | 46.0 |
| GSMUA_Achr9P04050_001 | Banana | endoplasmic reticulum, extracellular | 56.39 | 45.18 |
| VIT_11s0103g00260.t01 | Wine grape | cytosol | 39.1 | 44.07 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, vacuole | 60.15 | 43.24 |
| VIT_08s0040g03360.t01 | Wine grape | plastid | 60.9 | 42.86 |
| AT2G31200.1 | Thale cress | cytosol | 45.86 | 41.78 |
| VIT_10s0092g00330.t01 | Wine grape | cytosol | 28.57 | 41.76 |
| AT4G34970.1 | Thale cress | cytosol | 40.6 | 38.3 |
| AT2G16700.1 | Thale cress | cytosol | 40.6 | 37.76 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum | 59.4 | 36.41 |
| GSMUA_Achr2P16220_001 | Banana | cytosol | 57.89 | 27.7 |
Protein Annotations
| MapMan:20.2.2.8 | Gene3D:3.40.20.10 | EntrezGene:823742 | InterPro:ADF-H | InterPro:ADF-H/Gelsolin-like_dom_sf | InterPro:ADF/Cofilin |
| ProteinID:AEE78098.1 | ArrayExpress:AT3G45990 | EnsemblPlantsGene:AT3G45990 | RefSeq:AT3G45990 | TAIR:AT3G45990 | RefSeq:AT3G45990-TAIR-G |
| EnsemblPlants:AT3G45990.1 | TAIR:AT3G45990.1 | Unigene:At.53781 | ProteinID:CAB82823.1 | GO:GO:0003674 | GO:GO:0003779 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005856 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0015629 | GO:GO:0016043 | GO:GO:0030042 |
| InterPro:IPR002108 | InterPro:IPR029006 | RefSeq:NP_190185.1 | PFAM:PF00241 | PO:PO:0000084 | PO:PO:0004507 |
| PO:PO:0009009 | PO:PO:0009047 | PRINTS:PR00006 | PFscan:PS51263 | PANTHER:PTHR11913 | PANTHER:PTHR11913:SF50 |
| UniProt:Q9LZT3 | SMART:SM00102 | SUPFAM:SSF55753 | UniParc:UPI00000A3B76 | : | : |
Description
ADF11Putative actin-depolymerizing factor 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZT3]
Coordinates
chr3:-:16900778..16904136
Molecular Weight (calculated)
15905.2 Da
IEP (calculated)
8.081
GRAVY (calculated)
-0.599
Length
133 amino acids
Sequence
(BLAST)
(BLAST)
001: MVLHDDCKLT FLELKERRTF RSIVYKIEDN MQVIVEKHHY KKMHGEREQS YEEFANSLPA DECRYAILDI EFVPGERKIC FIAWSPSTAK MRKKMIYSST
101: KDRFKRELDG IQVEFHATDL TDISLDAIRR RIN
101: KDRFKRELDG IQVEFHATDL TDISLDAIRR RIN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.