CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
plastid 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	cytosol
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX99133	Canola	cytosol, plastid	98.8	98.8
Bra038266.1-P	Field mustard	cytosol	97.01	97.01
KRH19714	Soybean	nucleus	71.26	85.61
CDY31586	Canola	cytosol	67.66	85.61
AT3G46000.2	Thale cress	cytosol	79.64	85.26
CDX71067	Canola	cytosol	67.07	84.85
GSMUA_Achr10P...	Banana	cytosol	64.67	81.82
KRH11708	Soybean	mitochondrion	67.07	80.58
KRH32309	Soybean	cytosol, nucleus	69.46	80.56
Os05t0113400-01	Rice	cytosol, extracellular, plastid	66.47	80.43
KRH36708	Soybean	mitochondrion	66.47	79.86
PGSC0003DMT400008913	Potato	cytosol	65.27	79.56
Solyc06g005360.2.1	Tomato	cytosol, extracellular, nucleus	65.27	79.56
GSMUA_Achr6P15320_001	Banana	cytosol	62.87	79.55
CDY09242	Canola	cytosol	71.86	78.43
HORVU0Hr1G000200.1	Barley	cytosol	65.27	78.42
CDX88730	Canola	cytosol	71.86	77.92
EER95084	Sorghum	cytosol	64.67	77.7
EES17589	Sorghum	cytosol	64.07	76.98
Zm00001d035629_P001	Maize	cytosol	61.68	74.1
CDX71068	Canola	cytosol	72.46	73.78
Zm00001d035625_P001	Maize	cytosol	57.48	73.28
CDX94438	Canola	cytosol	56.29	72.87
CDY52365	Canola	cytosol	56.29	72.87
CDX89411	Canola	cytosol	56.29	72.87
CDY31909	Canola	cytosol	55.69	71.54
CDX90057	Canola	cytosol	55.69	69.92
CDY32581	Canola	cytosol	22.16	68.52
GSMUA_Achr9P04050_001	Banana	endoplasmic reticulum, extracellular	67.66	68.07
GSMUA_Achr6P33310_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	67.07	67.47
AT3G45990.1	Thale cress	cytosol	52.69	66.17
CDY15154	Canola	cytosol	59.28	66.0
CDY54088	Canola	cytosol	37.13	63.92
GSMUA_Achr10P...	Banana	endoplasmic reticulum, vacuole	69.46	62.7
CDY72027	Canola	cytosol	40.12	62.62
VIT_08s0040g03360.t01	Wine grape	plastid	69.46	61.38
CDY24750	Canola	cytosol	52.69	60.27
CDY10786	Canola	cytosol	52.1	59.59
VIT_11s0103g00260.t01	Wine grape	cytosol	41.92	59.32
CDX88731	Canola	cytosol, plastid	70.66	59.3
CDY38025	Canola	cytosol	59.28	56.25
VIT_10s0092g00330.t01	Wine grape	cytosol	30.54	56.04
CDX92721	Canola	mitochondrion	59.28	55.31
GSMUA_Achr10P...	Banana	endoplasmic reticulum	70.66	54.38
CDX75477	Canola	cytosol	38.32	52.89
CDY40654	Canola	cytosol	38.32	52.03
CDX69101	Canola	cytosol	42.52	50.0
CDY02247	Canola	cytosol	41.92	48.95
CDX89737	Canola	cytosol	41.92	48.95
CDX72508	Canola	cytosol	40.12	48.91
CDX80216	Canola	cytosol	72.46	48.02
CDY50194	Canola	cytosol	59.28	46.48
CDY02249	Canola	cytosol	16.77	43.08
GSMUA_Achr2P16220_001	Banana	cytosol	69.46	41.73
CDY07204	Canola	cytosol	58.68	36.16
CDY51146	Canola	cytosol, mitochondrion	58.08	27.56

Protein Annotations

MapMan:20.2.2.8	Gene3D:3.40.20.10	GO:A0A078DFJ1	InterPro:ADF-H	InterPro:ADF-H/Gelsolin-like_dom_sf	InterPro:ADF/Cofilin
EnsemblPlants:CDX86048	ProteinID:CDX86048	ProteinID:CDX86048.1	GO:GO:0003674	GO:GO:0003779	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005856	GO:GO:0008150
GO:GO:0009987	GO:GO:0015629	GO:GO:0016043	GO:GO:0030042	EnsemblPlantsGene:GSBRNA2T00144004001	InterPro:IPR002108
InterPro:IPR029006	PFAM:PF00241	PFscan:PS51263	PANTHER:PTHR11913	PANTHER:PTHR11913:SF33	SMART:SM00102
SUPFAM:SSF55753	UniParc:UPI0004EE3773	:	:	:	:

Description

BnaC03g55630D

Coordinates

chrLK031844:+:631436..633031

Molecular Weight (calculated)

19165.6 Da

IEP (calculated)

4.685

GRAVY (calculated)

-0.383

Length

167 amino acids

Sequence
(BLAST)

001: MVSSQSSSFY CFKVVRYDID FACGFESESV LANAASGMAV HDDCKLKFLE LKAKRTFRTI VYKIEDKQVI VEKLGEPEQS YDDFAASLPD NECRYAIYDF
101: DFVTEENCQK SKIFFIAWSP DTAKVRDKMI YASSKDRFKK ELDGIQVELQ ATDPTEMGLD VFKSRTN

Best Arabidopsis Sequence Match ( AT3G46000.1 )
(BLAST)

001: MANAASGMAV HDDCKLKFME LKAKRTFRTI VYKIEDKQVI VEKLGEPEQS YDDFAASLPA DDCRYCIYDF DFVTAENCQK SKIFFIAWSP DTAKVRDKMI
101: YASSKDRFKR ELDGIQVELQ ATDPTEMGLD VFKSRTN

Arabidopsis Description

ADF2Actin depolymerizing factor 2 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LRV3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.